y
Basic Information | |
---|---|
Species | Manihot esculenta |
Cazyme ID | cassava4.1_004799m |
Family | AA1 |
Protein Properties | Length: 558 Molecular Weight: 60966.9 Isoelectric Point: 9.1323 |
Chromosome | Chromosome/Scaffold: 11643 Start: 50141 End: 52932 |
Description | Laccase/Diphenol oxidase family protein |
View CDS |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
AA1 | 22 | 543 | 0 |
CRVRRYKFDVVMKNTTRLCSTKPIVTVNGRFPGPTLYAREGDTVLVRVVNKVKYNVSIHWHGIRQLRTGWADGPAYITQCPIQPGQNYVYNFTITGQRGT LLWHAHILWLRSTVHGAIVILPKHGVPYPFPTPDKEVVVVLAEWWKSDTEAVINEALKSGLAPNVSDAHTINGHPGVVSNCPSQGGFTLPVESGKTYMLR LINAALNEELFFKIAGHQLTVVEVDALYVKPFKTDTVLIAPGQTTNILVTADKSTGKYLVAASPFMDAPIAVDNRTATATLHYSGTLGSSPTTLTNPPPK NATAVANKFINSLRSLNSEKYPANVPLTIDHNLFFTVGLGVNPCPACKAGNGSRVVASINNVTFVMPTTALLQAHFFNISGVFTSDFPANPQHSFNFTGS GPANLQTSNGTKVYRLKYNSTVQLVMQDTGIVAPENHPVHLHGFNFFVVGRGIGNYNPNTDPQNFNLVDPPERNTVGVPTGGWTAIRFRADNPGVWFMHC HLEVHTTWGLKMAFLVDNGKGP |
Full Sequence |
---|
Protein Sequence Length: 558 Download |
MDSQFRFLLL LLCLLLPALV DCRVRRYKFD VVMKNTTRLC STKPIVTVNG RFPGPTLYAR 60 EGDTVLVRVV NKVKYNVSIH WHGIRQLRTG WADGPAYITQ CPIQPGQNYV YNFTITGQRG 120 TLLWHAHILW LRSTVHGAIV ILPKHGVPYP FPTPDKEVVV VLAEWWKSDT EAVINEALKS 180 GLAPNVSDAH TINGHPGVVS NCPSQGGFTL PVESGKTYML RLINAALNEE LFFKIAGHQL 240 TVVEVDALYV KPFKTDTVLI APGQTTNILV TADKSTGKYL VAASPFMDAP IAVDNRTATA 300 TLHYSGTLGS SPTTLTNPPP KNATAVANKF INSLRSLNSE KYPANVPLTI DHNLFFTVGL 360 GVNPCPACKA GNGSRVVASI NNVTFVMPTT ALLQAHFFNI SGVFTSDFPA NPQHSFNFTG 420 SGPANLQTSN GTKVYRLKYN STVQLVMQDT GIVAPENHPV HLHGFNFFVV GRGIGNYNPN 480 TDPQNFNLVD PPERNTVGVP TGGWTAIRFR ADNPGVWFMH CHLEVHTTWG LKMAFLVDNG 540 KGPNESLLPP PNDLPKC* 600 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR03390 | ascorbOXfungal | 5.0e-46 | 31 | 539 | 561 | + L-ascorbate oxidase, fungal type. This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. | ||
pfam07732 | Cu-oxidase_3 | 1.0e-51 | 30 | 146 | 119 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
PLN02604 | PLN02604 | 2.0e-89 | 20 | 535 | 543 | + oxidoreductase | ||
TIGR03388 | ascorbase | 5.0e-99 | 24 | 535 | 543 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 22 | 557 | 539 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002308208.1 | 0 | 5 | 557 | 7 | 560 | laccase 1c [Populus trichocarpa] |
RefSeq | XP_002308209.1 | 0 | 7 | 557 | 1 | 550 | laccase 1d [Populus trichocarpa] |
RefSeq | XP_002322961.1 | 0 | 3 | 557 | 4 | 557 | laccase 1a [Populus trichocarpa] |
RefSeq | XP_002322962.1 | 0 | 3 | 557 | 4 | 557 | laccase 1b [Populus trichocarpa] |
RefSeq | XP_002533894.1 | 0 | 1 | 557 | 1 | 556 | laccase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 23 | 535 | 2 | 521 | A Chain A, Unusual Structural Features In The Parallel Beta-Helix In Pectate Lyases |
PDB | 1asq_A | 0 | 23 | 535 | 2 | 521 | A Chain A, Unusual Structural Features In The Parallel Beta-Helix In Pectate Lyases |
PDB | 1asp_B | 0 | 23 | 535 | 2 | 521 | A Chain A, Unusual Structural Features In The Parallel Beta-Helix In Pectate Lyases |