y
Basic Information | |
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Species | Manihot esculenta |
Cazyme ID | cassava4.1_004821m |
Family | CE8 |
Protein Properties | Length: 557 Molecular Weight: 61302.1 Isoelectric Point: 9.6608 |
Chromosome | Chromosome/Scaffold: 04457 Start: 295426 End: 298283 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 245 | 540 | 0 |
LIVAKDGTGNFTTIGQAVAAAPNSSTTRFVIYIKAGAYFENVDVEKKKKMLMFIGDGIGKTVVKANRSVVDGWTTFRSATVAVLGTGFIAKGITFENSAG PSKHQAVALRSGSDLSAFYQCSFVGYQDTLYVHSLRQFYRECDIYGTIDFIFGNAAAVFQNCNLYARKPNDNQKNIFTAQGREDPNQNTGISILNSKVTA AADLIPVKSSFKTYLGRPWKEYSRTVFLRSYIDDVVDPAGWLEWNGSFALGTLYYGEYMNRGPGSHTSARVTWPGYRVVNSSAEASQFTVDAFIQG |
Full Sequence |
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Protein Sequence Length: 557 Download |
MYFLSARTKL LLTLLPVSVF LLILLTLPLK NSPTAEIPHL HIHKHFQIAH SACEGTLYPQ 60 LCVSTLLALP DLTSKSLPEL ISGTINRTMY EVGVSYSNCS GIRNKFRKIK KIENVALTDC 120 LELFSETIDE LKLALADLST KASVSKHYHD LQTLLSAAMT NQYTCLDGFA YTRGNVRKTI 180 KTSLYNISRH VSNSLVMLKK ISGVNASKSA AFPDHGNMKR GFPSWLSSKD RKLLQAPPNA 240 TKFDLIVAKD GTGNFTTIGQ AVAAAPNSST TRFVIYIKAG AYFENVDVEK KKKMLMFIGD 300 GIGKTVVKAN RSVVDGWTTF RSATVAVLGT GFIAKGITFE NSAGPSKHQA VALRSGSDLS 360 AFYQCSFVGY QDTLYVHSLR QFYRECDIYG TIDFIFGNAA AVFQNCNLYA RKPNDNQKNI 420 FTAQGREDPN QNTGISILNS KVTAAADLIP VKSSFKTYLG RPWKEYSRTV FLRSYIDDVV 480 DPAGWLEWNG SFALGTLYYG EYMNRGPGSH TSARVTWPGY RVVNSSAEAS QFTVDAFIQG 540 SEWLNSTGVP FFSGLS* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02933 | PLN02933 | 0 | 74 | 555 | 491 | + Probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 244 | 541 | 298 | + Pectinesterase. | ||
PLN02484 | PLN02484 | 0 | 30 | 556 | 536 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02713 | PLN02713 | 0 | 116 | 555 | 466 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 0 | 34 | 555 | 531 | + pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACQ85264.1 | 0 | 40 | 556 | 46 | 565 | pectin methylesterase [Musa acuminata AAA Group] |
EMBL | CBI36883.1 | 0 | 7 | 530 | 17 | 499 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002271665.1 | 0 | 1 | 556 | 1 | 564 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002301486.1 | 0 | 108 | 556 | 2 | 450 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523113.1 | 0 | 29 | 556 | 31 | 557 | Pectinesterase-3 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 244 | 555 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 246 | 555 | 6 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 2e-26 | 240 | 512 | 1 | 314 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 2e-26 | 240 | 512 | 1 | 314 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 2e-26 | 240 | 512 | 1 | 314 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO778758 | 478 | 81 | 557 | 0 |
ES850416 | 340 | 213 | 551 | 0 |
HO852920 | 432 | 125 | 555 | 0 |
DT544087 | 307 | 194 | 500 | 0 |
GR707209 | 256 | 221 | 476 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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