| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_005239m |
| Family | GH14 |
| Protein Properties | Length: 536 Molecular Weight: 59219.8 Isoelectric Point: 6.4626 |
| Chromosome | Chromosome/Scaffold: 09365 Start: 148401 End: 151128 |
| Description | beta-amylase 3 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 85 | 494 | 0 |
| YVGLPLDAVSDCNTVNHARAISVGLKALKLLGIEGVEMAVWWGIAEKEAMGKYEWEGYLALAEMVENAGLKLHVSLCFHANEQPKIPLPVWVSHIGESEP GIFFADRSGHNFRECLSLAVDDLPVLGGKTPVQVYQEFCNSFKSSFSHLMGSTITGITMGLGPNGELRYPSYRGREGKSRKILGVGEFQCYDKNMLNLLK QHADTMGNPLWGLGGPHDAPGYDQLPNSNSFFKDQGGSWESPYGSFFLSWYSSQLLSHGNRLLSIASAEFGDSAVTTYGKVPLVHSWYKTRAHPSELTAG FYNTENRDGYEAVAGMFARNSCKMILPGMDLSDEHQPQGSLSSPELLLAQIRKACRKYGVDVSGQNSLVSKAPHHFEQMRENLLGANEIGMFTYQRMGAE FFSPEHFPAF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 536 Download |
| MEVSVIGSSQ ATICRTELVH RELSFCVPRR NYTSVSFSDS GKRWRRNSSL RLTLNAIQTE 60 PVLSNNLSTR DRASGSKSLD GVRLYVGLPL DAVSDCNTVN HARAISVGLK ALKLLGIEGV 120 EMAVWWGIAE KEAMGKYEWE GYLALAEMVE NAGLKLHVSL CFHANEQPKI PLPVWVSHIG 180 ESEPGIFFAD RSGHNFRECL SLAVDDLPVL GGKTPVQVYQ EFCNSFKSSF SHLMGSTITG 240 ITMGLGPNGE LRYPSYRGRE GKSRKILGVG EFQCYDKNML NLLKQHADTM GNPLWGLGGP 300 HDAPGYDQLP NSNSFFKDQG GSWESPYGSF FLSWYSSQLL SHGNRLLSIA SAEFGDSAVT 360 TYGKVPLVHS WYKTRAHPSE LTAGFYNTEN RDGYEAVAGM FARNSCKMIL PGMDLSDEHQ 420 PQGSLSSPEL LLAQIRKACR KYGVDVSGQN SLVSKAPHHF EQMRENLLGA NEIGMFTYQR 480 MGAEFFSPEH FPAFTKFVRS LKQQEKHADD LPEEEEEVAE SLLTSSESGI QMQAA* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02905 | PLN02905 | 5.0e-88 | 30 | 501 | 489 | + beta-amylase | ||
| PLN02801 | PLN02801 | 6.0e-103 | 82 | 509 | 445 | + beta-amylase | ||
| PLN02161 | PLN02161 | 4.0e-105 | 29 | 501 | 492 | + beta-amylase | ||
| PLN00197 | PLN00197 | 4.0e-124 | 81 | 503 | 439 | + beta-amylase; Provisional | ||
| PLN02803 | PLN02803 | 1.0e-126 | 74 | 508 | 442 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAI39245.1 | 0 | 1 | 535 | 1 | 536 | beta-amylase [Glycine max] |
| EMBL | CAN66037.1 | 0 | 1 | 535 | 1 | 541 | hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002276777.1 | 0 | 1 | 535 | 1 | 541 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002312750.1 | 0 | 79 | 516 | 1 | 437 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002516865.1 | 0 | 1 | 535 | 1 | 545 | Beta-amylase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1b1y_A | 0 | 82 | 531 | 6 | 472 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
| PDB | 1v3i_A | 0 | 79 | 509 | 9 | 444 | A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase |
| PDB | 1q6g_A | 0 | 79 | 509 | 9 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (N340t) With Increased Ph Optimum |
| PDB | 1q6d_A | 0 | 79 | 509 | 9 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t) With Increased Ph Optimum |
| PDB | 1q6f_A | 0 | 79 | 509 | 9 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t) With Increased Ph Optimum |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
| Hydropathy |
|---|
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO781436 | 407 | 130 | 536 | 0 |
| HO796964 | 392 | 145 | 536 | 0 |
| EG631213 | 330 | 181 | 510 | 0 |
| JK987540 | 295 | 116 | 410 | 0 |
| HO781436 | 103 | 35 | 136 | 3e-22 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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