y
Basic Information | |
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Species | Manihot esculenta |
Cazyme ID | cassava4.1_005532m |
Family | GH14 |
Protein Properties | Length: 523 Molecular Weight: 59418.2 Isoelectric Point: 8.8259 |
Chromosome | Chromosome/Scaffold: 03332 Start: 532804 End: 539906 |
Description | beta-amylase 4 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 87 | 511 | 0 |
FVMMPVDTFCIDSSGSPRIRKIKALTISLKALKLAGVYGIAVEVWWGIVERFSPLEYNWFLYEELFRLVSESGLKLHVSLCFHSNTHVSPGTGGVGLPLW ILEIGDHNRDIYYQDKSGFSNDDYLTLGVDQLPLFCGRTALQCYEDFMLSFVNKFDSYIGSVIEEISVGLGPSGELRYPAHPLGDGRWKFPGIGEFQCYD KYMMEDLKMAACKEGKPQWGDRGPQNAGCYNSLPPGVPFFEDGQESFLSDYGRFFLEWYSGKLICHADAILAKAANILKKYQQDKQTPVILVAKIGGIYW WYQTISHPAELTAGYYNTALRDGYDPVASVLSRHGAALHISCLEMIDSETPQAYHCSPEGLVQQIRTISKKRIHLIGRNTSERFDQNGLRQILANCYHPQ AEAVRSFTYFRMNDKIFAVENWNNF |
Full Sequence |
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Protein Sequence Length: 523 Download |
MAGNGGVARR CACRRSYAAF REVSFLSRRK TRTNLRNVSM IPLFKRPLLY PRWRSLSGSY 60 RILSMDAREK SRSTLLESSR HKKVPIFVMM PVDTFCIDSS GSPRIRKIKA LTISLKALKL 120 AGVYGIAVEV WWGIVERFSP LEYNWFLYEE LFRLVSESGL KLHVSLCFHS NTHVSPGTGG 180 VGLPLWILEI GDHNRDIYYQ DKSGFSNDDY LTLGVDQLPL FCGRTALQCY EDFMLSFVNK 240 FDSYIGSVIE EISVGLGPSG ELRYPAHPLG DGRWKFPGIG EFQCYDKYMM EDLKMAACKE 300 GKPQWGDRGP QNAGCYNSLP PGVPFFEDGQ ESFLSDYGRF FLEWYSGKLI CHADAILAKA 360 ANILKKYQQD KQTPVILVAK IGGIYWWYQT ISHPAELTAG YYNTALRDGY DPVASVLSRH 420 GAALHISCLE MIDSETPQAY HCSPEGLVQQ IRTISKKRIH LIGRNTSERF DQNGLRQILA 480 NCYHPQAEAV RSFTYFRMND KIFAVENWNN FVPFVRKMST DL* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02905 | PLN02905 | 1.0e-98 | 84 | 518 | 449 | + beta-amylase | ||
PLN02801 | PLN02801 | 2.0e-133 | 84 | 522 | 456 | + beta-amylase | ||
PLN00197 | PLN00197 | 5.0e-134 | 46 | 518 | 487 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 2.0e-153 | 62 | 519 | 466 | + beta-amylase | ||
PLN02161 | PLN02161 | 0 | 27 | 522 | 497 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK76508.1 | 0 | 40 | 522 | 1 | 484 | putative beta-amylase [Arabidopsis thaliana] |
GenBank | AAK84008.1 | 0 | 61 | 519 | 56 | 508 | AF393847_1 beta-amylase PCT-BMYI [Solanum tuberosum] |
DDBJ | BAH20280.1 | 0 | 27 | 522 | 2 | 498 | AT5G55700 [Arabidopsis thaliana] |
RefSeq | NP_568829.2 | 0 | 27 | 522 | 35 | 531 | BAM4 (BETA-AMYLASE 4); beta-amylase/ catalytic/ cation binding [Arabidopsis thaliana] |
RefSeq | XP_002265698.1 | 0 | 1 | 522 | 1 | 522 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1wdr_A | 0 | 84 | 521 | 12 | 444 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
PDB | 1q6d_A | 0 | 84 | 521 | 12 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t) With Increased Ph Optimum |
PDB | 1v3i_A | 0 | 84 | 521 | 12 | 444 | A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase |
PDB | 1ukp_D | 0 | 84 | 521 | 12 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1ukp_C | 0 | 84 | 521 | 12 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DT743582 | 283 | 237 | 518 | 0 |
EV096717 | 235 | 107 | 341 | 0 |
EX314375 | 274 | 185 | 458 | 0 |
DR365735 | 223 | 79 | 301 | 0 |
DT739913 | 239 | 284 | 521 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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