| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_005562m |
| Family | GH14 |
| Protein Properties | Length: 522 Molecular Weight: 59078.2 Isoelectric Point: 5.119 |
| Chromosome | Chromosome/Scaffold: 08974 Start: 18086 End: 20446 |
| Description | beta-amylase 5 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 19 | 438 | 0 |
| YVLLPLGVVTADNVLENKDELGKQLKELRAAGVDGVMVDVWWGIVESKGPKQYDWSAYKSLFELIQECDLKIQAIISFHQCGGNIGDAVNIPIPQWVRDV GEYDPDIFYTNRAGTRNKEYLTIGVDHLPLFGGRTAIEMYSDYMKSFRENMSDLLEAGVIIDIEVGLGPAGELRYPSYPQTQGWVFPGIGEFICYDKYLK AEFKEAAARAGNPEWELPDDAGEYNDTPENTGFFKPNGTYRTEKGNFFLIWYSNRLLIHGDEILDEANKAFLGCKVKIAAKVSGIHWWYKVDNHAAELTA GYYNLHERDGYRPIARMLSRHHAILNFTCLEMKDAEQPENAKSGPQELVMQVLSGAWRENIEVAGENALSRYDATAYNQILLNVRPNGVNKNGQPKLRMY GMTYLRLSDDLLEETNFKLF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 522 Download |
| MQAPTAYDEK MLANYVPIYV LLPLGVVTAD NVLENKDELG KQLKELRAAG VDGVMVDVWW 60 GIVESKGPKQ YDWSAYKSLF ELIQECDLKI QAIISFHQCG GNIGDAVNIP IPQWVRDVGE 120 YDPDIFYTNR AGTRNKEYLT IGVDHLPLFG GRTAIEMYSD YMKSFRENMS DLLEAGVIID 180 IEVGLGPAGE LRYPSYPQTQ GWVFPGIGEF ICYDKYLKAE FKEAAARAGN PEWELPDDAG 240 EYNDTPENTG FFKPNGTYRT EKGNFFLIWY SNRLLIHGDE ILDEANKAFL GCKVKIAAKV 300 SGIHWWYKVD NHAAELTAGY YNLHERDGYR PIARMLSRHH AILNFTCLEM KDAEQPENAK 360 SGPQELVMQV LSGAWRENIE VAGENALSRY DATAYNQILL NVRPNGVNKN GQPKLRMYGM 420 TYLRLSDDLL EETNFKLFKT FVRKMHADQD YCPDLKKYNH EIRPLERSKQ QIPTEVLTEA 480 TKALAPFPWD KETDMKVDGA GAGQPGLLAS LVNKIKSLFF K* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02705 | PLN02705 | 2.0e-114 | 15 | 448 | 437 | + beta-amylase | ||
| PLN02905 | PLN02905 | 8.0e-147 | 15 | 448 | 438 | + beta-amylase | ||
| PLN00197 | PLN00197 | 1.0e-151 | 16 | 465 | 461 | + beta-amylase; Provisional | ||
| PLN02803 | PLN02803 | 5.0e-166 | 16 | 445 | 433 | + beta-amylase | ||
| PLN02801 | PLN02801 | 0 | 1 | 520 | 520 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAZ38831.1 | 0 | 8 | 499 | 5 | 496 | beta-amylase [Glycine max] |
| DDBJ | BAA09462.1 | 0 | 8 | 499 | 5 | 496 | beta-amylase [Glycine max] |
| DDBJ | BAD93291.1 | 0 | 8 | 499 | 5 | 496 | beta-amylase [Glycine max] |
| RefSeq | XP_002327920.1 | 0 | 1 | 521 | 1 | 519 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002515712.1 | 0 | 1 | 521 | 1 | 518 | Beta-amylase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1wdp_A | 0 | 8 | 499 | 4 | 495 | A Chain A, Ascorbate Peroxidase R38a Mutant |
| PDB | 1q6c_A | 0 | 8 | 499 | 4 | 495 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
| PDB | 1bfn_A | 0 | 8 | 499 | 4 | 495 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
| PDB | 1v3i_A | 0 | 8 | 499 | 4 | 495 | A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase |
| PDB | 1v3h_A | 0 | 8 | 499 | 4 | 495 | A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
| Hydropathy |
|---|
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO777976 | 494 | 7 | 499 | 0 |
| HO803971 | 396 | 94 | 489 | 0 |
| HO782669 | 385 | 111 | 495 | 0 |
| GT625519 | 284 | 93 | 376 | 0 |
| CV290805 | 309 | 137 | 445 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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