y
Basic Information | |
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Species | Manihot esculenta |
Cazyme ID | cassava4.1_005656m |
Family | CE8 |
Protein Properties | Length: 518 Molecular Weight: 57103.1 Isoelectric Point: 7.1488 |
Chromosome | Chromosome/Scaffold: 07859 Start: 8652 End: 11111 |
Description | pectin methylesterase 44 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 205 | 500 | 0 |
AIVAADGTGNFTKIKDAVSAAPDYSMRRHIIYIKKGFYNEYVEIKKKKWNLMMVGDGMGVTVISGNRNFIDGWTTFRSATFAVSGRGFIARDLTFENTAG AAKHQAVALRSDSDLSVFFRCEFKGYQDTLYTHTMRQFYRDCRISGTVDFIFGDATAVFQNCQILAKKGLPNQKNTITAHGRKDPNQPTGYSIQFCNISA DIDLLPYANSTYTYLGRPWKNFSRTVFMQSYMSNAIRPEGWLEWNGDQYLETLYYGEYSNHGPGAGLGNRVRWPGYHIFNTSYQASNFTVAQFIEG |
Full Sequence |
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Protein Sequence Length: 518 Download |
MSRFSTPLPF ISLFAALILV SSTLSAAASS GSRSDSLQNE SLKVPISEFV GSLETTIGII 60 RDVTSTISNF GNFFGDRRLS NAITDCLDLL DFSADELSWT MSASQSPKGK NNSTGDLNSD 120 LRTWLSAALV NQDTCIDGFE GTSSILGSLV AGGLNQITSL VQELLNNVDS KSNSKTNGVE 180 NDKFPSWVKH EDRKLLVING VTPDAIVAAD GTGNFTKIKD AVSAAPDYSM RRHIIYIKKG 240 FYNEYVEIKK KKWNLMMVGD GMGVTVISGN RNFIDGWTTF RSATFAVSGR GFIARDLTFE 300 NTAGAAKHQA VALRSDSDLS VFFRCEFKGY QDTLYTHTMR QFYRDCRISG TVDFIFGDAT 360 AVFQNCQILA KKGLPNQKNT ITAHGRKDPN QPTGYSIQFC NISADIDLLP YANSTYTYLG 420 RPWKNFSRTV FMQSYMSNAI RPEGWLEWNG DQYLETLYYG EYSNHGPGAG LGNRVRWPGY 480 HIFNTSYQAS NFTVAQFIEG NLWLPSTGVK YTAGLDV* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02484 | PLN02484 | 5.0e-171 | 63 | 517 | 471 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 6.0e-175 | 42 | 515 | 478 | + pectinesterase/pectinesterase inhibitor | ||
PLN02201 | PLN02201 | 0 | 38 | 517 | 491 | + probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 204 | 501 | 298 | + Pectinesterase. | ||
PLN02506 | PLN02506 | 0 | 45 | 515 | 480 | + putative pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAQ21124.1 | 0 | 17 | 517 | 14 | 514 | pectinesterase [Fragaria x ananassa] |
GenBank | ABK92470.1 | 0 | 26 | 517 | 29 | 528 | unknown [Populus trichocarpa] |
DDBJ | BAF42041.1 | 0 | 29 | 515 | 24 | 507 | pectin methylesterase 4 [Pyrus communis] |
Swiss-Prot | Q43062 | 0 | 29 | 517 | 36 | 522 | PME_PRUPE RecName: Full=Pectinesterase/pectinesterase inhibitor PPE8B; Includes: RecName: Full=Pectinesterase inhibitor PPE8B; AltName: Full=Pectin methylesterase inhibitor PPE8B; Includes: RecName: Full=Pectinesterase PPE8B; Short=PE PPE8B; AltName: Full=Pectin methylesterase PPE8B; Flags: Precursor |
RefSeq | XP_002326321.1 | 0 | 26 | 517 | 21 | 520 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 201 | 515 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 201 | 515 | 5 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1qjv_B | 1e-24 | 215 | 506 | 18 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 1e-24 | 215 | 506 | 18 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 2e-24 | 215 | 506 | 18 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |