| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_005968m |
| Family | CBM43 |
| Protein Properties | Length: 507 Molecular Weight: 55570 Isoelectric Point: 6.3956 |
| Chromosome | Chromosome/Scaffold: 09501 Start: 317621 End: 321259 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 374 | 456 | 2.1e-31 |
| WCIASSNVSQLDLQSALDWACGSGNVDCTAIQPSQPCFEPDTLLSHASYAFNSYYQQNGASDVACSFGGAGDKVDKDPSYDNC | |||
| GH17 | 34 | 352 | 0 |
| VGVCYGRSADDLPTPDKVAKLVQQHNIKYLRIYDSNIQVLKAFANTGVELMVGVPNSDLLALSQFQSNADSWLKNSILPYYPATKITYITVGAEVTESPN NASALVVPAMHNVLTALKKVGLHRRIKVSSTHSLGVLSRSFPPSAGAFNSSHAFFLKPMLEFLADNQSPFMINIYPYYAYRDSPNKVSLDYALFESSSEV IDPNTGLLYTNMLDAQIDALYFALMALNFRTINVMVTETGWPSKGSPKETAATPDNAQTYNTNLIRRVINNSGTPAKPGEELDVYIFSLFNENRKPGLES ERNWGIFYPDQTSVYNLDF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 507 Download |
| MKDLFWITMA RGFKLVFAIS LLLTLLVFCR GSKVGVCYGR SADDLPTPDK VAKLVQQHNI 60 KYLRIYDSNI QVLKAFANTG VELMVGVPNS DLLALSQFQS NADSWLKNSI LPYYPATKIT 120 YITVGAEVTE SPNNASALVV PAMHNVLTAL KKVGLHRRIK VSSTHSLGVL SRSFPPSAGA 180 FNSSHAFFLK PMLEFLADNQ SPFMINIYPY YAYRDSPNKV SLDYALFESS SEVIDPNTGL 240 LYTNMLDAQI DALYFALMAL NFRTINVMVT ETGWPSKGSP KETAATPDNA QTYNTNLIRR 300 VINNSGTPAK PGEELDVYIF SLFNENRKPG LESERNWGIF YPDQTSVYNL DFEGRSVVDV 360 PKNTTSTRSN GTTWCIASSN VSQLDLQSAL DWACGSGNVD CTAIQPSQPC FEPDTLLSHA 420 SYAFNSYYQQ NGASDVACSF GGAGDKVDKD PSYDNCLYMT TGTNKTAASN TTAMASSSSH 480 SPSLNKVFVW AFCFLLMTFL GLLNIA* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 2.0e-9 | 72 | 343 | 277 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 4.0e-22 | 373 | 444 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 7.0e-39 | 373 | 458 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 3.0e-112 | 34 | 352 | 319 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABD91576.1 | 0 | 9 | 472 | 1 | 468 | beta-1,3-glucanase [Medicago sativa] |
| GenBank | ABD91577.1 | 0 | 9 | 472 | 1 | 468 | beta-1,3-glucanase [Medicago sativa] |
| RefSeq | XP_002283473.1 | 0 | 9 | 503 | 1 | 494 | PREDICTED: similar to beta-1,3-glucanase [Vitis vinifera] |
| RefSeq | XP_002330523.1 | 0 | 29 | 462 | 22 | 455 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002514201.1 | 0 | 9 | 475 | 1 | 468 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 34 | 352 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_B | 0 | 34 | 352 | 3 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_A | 0 | 34 | 352 | 3 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur7_B | 0 | 34 | 352 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 0 | 34 | 352 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
