| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_006146m |
| Family | CBM43 |
| Protein Properties | Length: 499 Molecular Weight: 54650.3 Isoelectric Point: 8.5016 |
| Chromosome | Chromosome/Scaffold: 07991 Start: 321661 End: 324012 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 374 | 456 | 1.2e-32 |
| WCVPRSDASDAALQKNIDYACSSGINCRPIQAGGPCFDPNTVRSHASYAMNAYYQSFGRQDFNCDFNHTGVVTTTDPSYEACS | |||
| GH17 | 34 | 346 | 0 |
| VGVNYGTVANNLPPPTQVASFLKTQTTIDRIKIFDANPDILRAFANTGILVTVTVGNGDIPSLAKLPAAQAWIANNILPFHPKTIIKYIAVGNEILATSD KSLIAHTLPAMKALKSALELANVTNIQVSTPHSLGILSSSEPPSTGRFRKGYDQRIFAPILDFHRKTKSPFMVNPYPYFGFRPETLNYALFRPNAGVFDP ATGKNYTNMFDAQLDAVYSAMKRLGYEDVDIVVAETGWPSVGDPNQPGVSMENALSYNGNLVKHVNSRKGTPLMPNRTFETYIFSLFNENLKPGISEQNF GLFKPDLTPVYDV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 499 Download |
| MAKPSISVSN PFLQLFLFLT FHLLHRLSTA AYSVGVNYGT VANNLPPPTQ VASFLKTQTT 60 IDRIKIFDAN PDILRAFANT GILVTVTVGN GDIPSLAKLP AAQAWIANNI LPFHPKTIIK 120 YIAVGNEILA TSDKSLIAHT LPAMKALKSA LELANVTNIQ VSTPHSLGIL SSSEPPSTGR 180 FRKGYDQRIF APILDFHRKT KSPFMVNPYP YFGFRPETLN YALFRPNAGV FDPATGKNYT 240 NMFDAQLDAV YSAMKRLGYE DVDIVVAETG WPSVGDPNQP GVSMENALSY NGNLVKHVNS 300 RKGTPLMPNR TFETYIFSLF NENLKPGISE QNFGLFKPDL TPVYDVGVLR NAQAKGPTSG 360 TRAVAPSSSP DRKWCVPRSD ASDAALQKNI DYACSSGINC RPIQAGGPCF DPNTVRSHAS 420 YAMNAYYQSF GRQDFNCDFN HTGVVTTTDP SYEACSYPFS DQKMEEKSVA GESMRLYCSV 480 KELLLVGGCL VFVNLFFY* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 2.0e-23 | 373 | 444 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 5.0e-43 | 373 | 457 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-93 | 34 | 346 | 320 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002283647.1 | 0 | 13 | 457 | 6 | 445 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
| RefSeq | XP_002298356.1 | 0 | 28 | 451 | 21 | 447 | glycoside hydrolase [Populus trichocarpa] |
| RefSeq | XP_002312097.1 | 0 | 17 | 457 | 13 | 447 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002530862.1 | 0 | 28 | 459 | 22 | 447 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| RefSeq | XP_002532848.1 | 0 | 28 | 493 | 19 | 477 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 34 | 346 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1ghs_B | 0 | 34 | 346 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 0 | 34 | 346 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3f55_D | 0 | 34 | 346 | 2 | 313 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3f55_C | 0 | 34 | 346 | 2 | 313 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
