| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_006171m |
| Family | CBM43 |
| Protein Properties | Length: 498 Molecular Weight: 51867.9 Isoelectric Point: 7.073 |
| Chromosome | Chromosome/Scaffold: 02264 Start: 565565 End: 567388 |
| Description | Carbohydrate-binding X8 domain superfamily protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 313 | 394 | 1.3e-35 |
| WCVAKSGSPETALQSALDYACGMGGADCSQIQQGGSCYNPNTLQNHASYAFNSYYQKNPVATSCDFGGTATIVSANPSTGSC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 498 Download |
| MTFVPQVNIK SVIVRSSNDL SKLLSSLKLI HSVLSSSQFN SEVKVSVAIP SSFLENLDAT 60 QEHHLLRVLG FIKRTRSFII VEGSIDNGAE LSMGDLVLKS IIQKAKLSTS ILTCNDVNVV 120 MTVKGLIDPS GRDLAEFAAK FSKSLQKTKV SGQIAELYAE VSSMEDFVEK ELKREHEQIF 180 PLSRRELFKT TSHDMINPPV TVPQGNPTPT IVTVPATNPV TITPANPAST PVPIPSTTPV 240 VVPPTNPSVN PPPPITNPVT TPAPVTVPGM QPITNPVTTY PTPPVNVPVT TPVTNPVSPP 300 VTTNAPAIPG QSWCVAKSGS PETALQSALD YACGMGGADC SQIQQGGSCY NPNTLQNHAS 360 YAFNSYYQKN PVATSCDFGG TATIVSANPS TGSCVFPLSS TSSSTSTPPS LPTPTPSTSI 420 TNPATTPSSP GAGTSGTVTP PSVLNSSSPG SGTTTGFGSE TPPGFSTSTS KSASLQPSIG 480 GIILITFFII RIIILDM* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 9.0e-25 | 312 | 383 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 2.0e-43 | 312 | 396 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN65737.1 | 0 | 15 | 497 | 31 | 519 | hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002276666.1 | 0 | 1 | 497 | 107 | 615 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002319461.1 | 0 | 1 | 497 | 106 | 615 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002463588.1 | 0 | 6 | 491 | 94 | 612 | hypothetical protein SORBIDRAFT_01g002540 [Sorghum bicolor] |
| RefSeq | XP_002512573.1 | 0 | 93 | 497 | 1 | 406 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 2e-17 | 312 | 400 | 12 | 100 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
