| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_006189m |
| Family | CBM43 |
| Protein Properties | Length: 497 Molecular Weight: 53266.3 Isoelectric Point: 5.5898 |
| Chromosome | Chromosome/Scaffold: 04005 Start: 39913 End: 45946 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 362 | 443 | 2.9e-31 |
| CVAKQSADSAKLQEGLNWACGQGGANCSAIQQGQPCYLPDTYQNHASYAYNDYYQKLHSTGGTCDFDGTATTTTVDPSYGSC | |||
| GH17 | 26 | 346 | 0 |
| VGINIGTGVSNMPSALDVVAILKANQITHVRLYDADAHMLKALANSGIEVMVGIKNEEVLGIGESPAAAAAWVNKNVASYVPSTNITAIAVGNEVLTTIP NAAAVLVPAINYIHKALVASNLNFLVKVSTPQSMDVIPRPFPPSTATFNSTWNSTIYQLLQFLKNTNSCYMLNAYPYHGYTTGNGIFPIDYALFRPLPSV KQIVDPNTLSHYNSMFDAMVDATYYAIDAFNISGIPIIVTETGWPWLGGANEPDATVENAEAFNNNLIRRVLNDSGPPSRPNIPTNTYIYELFNEDKKPG PVSKKNWGLFFTNGTAVYALS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 497 Download |
| MVLKKWFGSL LLLLFCMFSN AIGAYVGINI GTGVSNMPSA LDVVAILKAN QITHVRLYDA 60 DAHMLKALAN SGIEVMVGIK NEEVLGIGES PAAAAAWVNK NVASYVPSTN ITAIAVGNEV 120 LTTIPNAAAV LVPAINYIHK ALVASNLNFL VKVSTPQSMD VIPRPFPPST ATFNSTWNST 180 IYQLLQFLKN TNSCYMLNAY PYHGYTTGNG IFPIDYALFR PLPSVKQIVD PNTLSHYNSM 240 FDAMVDATYY AIDAFNISGI PIIVTETGWP WLGGANEPDA TVENAEAFNN NLIRRVLNDS 300 GPPSRPNIPT NTYIYELFNE DKKPGPVSKK NWGLFFTNGT AVYALSLSNS NRLTGNSSVT 360 YCVAKQSADS AKLQEGLNWA CGQGGANCSA IQQGQPCYLP DTYQNHASYA YNDYYQKLHS 420 TGGTCDFDGT ATTTTVDPSY GSCIFTGSSS SNTSGAIFPP VALGPTTTLG ESSSWNFQAS 480 IFQSLLTAAL LALILL* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 2.0e-13 | 360 | 417 | 63 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 1.0e-25 | 360 | 445 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-77 | 26 | 346 | 321 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB01763.1 | 0 | 37 | 470 | 1 | 435 | beta-1,3-glucanase-like protein [Arabidopsis thaliana] |
| EMBL | CAN72077.1 | 0 | 27 | 448 | 27 | 448 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_187965.1 | 0 | 1 | 470 | 1 | 471 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002283548.1 | 0 | 27 | 445 | 27 | 445 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002297638.1 | 0 | 37 | 496 | 1 | 461 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 26 | 347 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_B | 0 | 26 | 348 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_A | 0 | 26 | 348 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur7_B | 0 | 26 | 348 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 0 | 26 | 348 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
