y
Basic Information | |
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Species | Manihot esculenta |
Cazyme ID | cassava4.1_006309m |
Family | GH1 |
Protein Properties | Length: 493 Molecular Weight: 57244.6 Isoelectric Point: 6.2 |
Chromosome | Chromosome/Scaffold: 12341 Start: 8777 End: 11663 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 51 | 467 | 0 |
YQEDIKNVKKMGFNAFRMSISWSRVIPSGRRRQGVNEEGIQFYNNVIDEIISNGLEPFVTIFHWDTPQALQDKYGGFLSHEIVEDYLQYADLLFEKFGDR VKHWMTFNEPSAYVGFAHDDGVFAPGRCSSWVNRQCLAGNSTTEPYIIAHNLLLSHAAAVHQYRKHYQGTQKGKIGITLFTFWYEPLSNSAVDVQAAKTA LDFMFGLWMEPMTYGRYPKTMTDLAGDRLIKFTNNESQLLRGSYDFVGLQYYTAYYAKPNITVDPNFRRYKTDSGVIETPYDNNGNLIGPRAYSSWFYIF PKGIRHFLNYTKDTYNDPVIYITENGVDNYNNESQPIEEALQDDFRIEYYRKHMWNALGSLKEYNVNVKGYFAWSYLDNFEWNIGYTSRFGLYYVDYKDN LKRYPKKSALWFTKFLN |
Full Sequence |
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Protein Sequence Length: 493 Download |
MAMATMLVLF ISLLALTKPA MGTDDDDDIP EDFSRKYFPD DFIFGTATSA YQEDIKNVKK 60 MGFNAFRMSI SWSRVIPSGR RRQGVNEEGI QFYNNVIDEI ISNGLEPFVT IFHWDTPQAL 120 QDKYGGFLSH EIVEDYLQYA DLLFEKFGDR VKHWMTFNEP SAYVGFAHDD GVFAPGRCSS 180 WVNRQCLAGN STTEPYIIAH NLLLSHAAAV HQYRKHYQGT QKGKIGITLF TFWYEPLSNS 240 AVDVQAAKTA LDFMFGLWME PMTYGRYPKT MTDLAGDRLI KFTNNESQLL RGSYDFVGLQ 300 YYTAYYAKPN ITVDPNFRRY KTDSGVIETP YDNNGNLIGP RAYSSWFYIF PKGIRHFLNY 360 TKDTYNDPVI YITENGVDNY NNESQPIEEA LQDDFRIEYY RKHMWNALGS LKEYNVNVKG 420 YFAWSYLDNF EWNIGYTSRF GLYYVDYKDN LKRYPKKSAL WFTKFLNISV DANNIYEVTL 480 KDPRKVGKFY VM* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02814 | PLN02814 | 4.0e-110 | 33 | 471 | 481 | + beta-glucosidase | ||
PLN02998 | PLN02998 | 3.0e-110 | 1 | 466 | 508 | + beta-glucosidase | ||
COG2723 | BglB | 6.0e-114 | 38 | 464 | 476 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
TIGR03356 | BGL | 6.0e-116 | 39 | 462 | 468 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 5.0e-134 | 34 | 467 | 481 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAB22162.1 | 0 | 6 | 492 | 1 | 531 | linamarase [Manihot esculenta] |
GenBank | AAB71381.1 | 0 | 51 | 492 | 66 | 507 | linamarase [Manihot esculenta] |
GenBank | AAO49267.1 | 0 | 6 | 492 | 1 | 527 | AF480476_1 P66 protein [Hevea brasiliensis] |
GenBank | ABL01537.1 | 0 | 6 | 492 | 1 | 527 | beta glucosidase [Hevea brasiliensis] |
EMBL | CAA64442.1 | 0 | 25 | 492 | 32 | 541 | beta glucosidase [Manihot esculenta] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ptq_B | 0 | 34 | 466 | 30 | 503 | A Chain A, Crystal Structure Of A Methyltransferase-Like Protein (Spo2022) From Silicibacter Pomeroyi Dss-3 At 1.80 A Resolution |
PDB | 3ptq_A | 0 | 34 | 466 | 30 | 503 | A Chain A, Crystal Structure Of A Methyltransferase-Like Protein (Spo2022) From Silicibacter Pomeroyi Dss-3 At 1.80 A Resolution |
PDB | 3ptm_B | 0 | 34 | 466 | 30 | 503 | A Chain A, Crystal Structure Of A Methyltransferase-Like Protein (Spo2022) From Silicibacter Pomeroyi Dss-3 At 1.80 A Resolution |
PDB | 3ptm_A | 0 | 34 | 466 | 30 | 503 | A Chain A, Crystal Structure Of A Methyltransferase-Like Protein (Spo2022) From Silicibacter Pomeroyi Dss-3 At 1.80 A Resolution |
PDB | 3ptk_B | 0 | 34 | 466 | 30 | 503 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |