| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_006416m |
| Family | CBM43 |
| Protein Properties | Length: 489 Molecular Weight: 53521.1 Isoelectric Point: 6.8472 |
| Chromosome | Chromosome/Scaffold: 07859 Start: 55182 End: 56856 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 365 | 446 | 1.9e-24 |
| WCVLSPTASITDPSLASSISYACTYADCTSLGYGSSCSRLDPRQNASYAFNMYYQTMDQRIGSCSFNNLSVITNLNPSQGTC | |||
| GH17 | 27 | 345 | 0 |
| LGCNWGTQSTHPLQPNIVVQLLKDNGFNKVKLFEADPGALRALGRSGIQVMVGIPNDLLAPLASDFQAAVNWVQQNVSDYVSRHAVDIRYVAVGNEPFLK TYKDTFLHTTFPALKNIQAALVRAGLAKKVKVTVPLNADVYQTDNGLPSGGNFRSDIHDLMISIIKFLSDNDSPLTINIYPFLSLNADPNFPKEFAFFNG SAAPVVDGSISYTNVFEANFDTLISALEKNGFSSMPVIIGEIGWPTDGDPSANAEYAQWFNQGLLNRIFQGQGTPKRKTPPDIYLFSLIDEDDKSTLPGN FERHWGIFYFDGTIKYQLN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 489 Download |
| MGNSHMLCLF LLCLIGGEDV VKGVKGLGCN WGTQSTHPLQ PNIVVQLLKD NGFNKVKLFE 60 ADPGALRALG RSGIQVMVGI PNDLLAPLAS DFQAAVNWVQ QNVSDYVSRH AVDIRYVAVG 120 NEPFLKTYKD TFLHTTFPAL KNIQAALVRA GLAKKVKVTV PLNADVYQTD NGLPSGGNFR 180 SDIHDLMISI IKFLSDNDSP LTINIYPFLS LNADPNFPKE FAFFNGSAAP VVDGSISYTN 240 VFEANFDTLI SALEKNGFSS MPVIIGEIGW PTDGDPSANA EYAQWFNQGL LNRIFQGQGT 300 PKRKTPPDIY LFSLIDEDDK STLPGNFERH WGIFYFDGTI KYQLNIGNGK SLVPAKGVRY 360 LGRQWCVLSP TASITDPSLA SSISYACTYA DCTSLGYGSS CSRLDPRQNA SYAFNMYYQT 420 MDQRIGSCSF NNLSVITNLN PSQGTCRFEI MIDLGKHEIA PRRSLAGKIQ TSTMGVILAL 480 ILIIYGFF* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.0002 | 259 | 337 | 83 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 2.0e-15 | 364 | 433 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 1.0e-28 | 364 | 448 | 87 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 3.0e-74 | 27 | 345 | 321 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI27737.1 | 0 | 26 | 486 | 24 | 484 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_197587.1 | 0 | 5 | 485 | 8 | 499 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002277217.1 | 0 | 28 | 486 | 18 | 476 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002309443.1 | 0 | 26 | 450 | 1 | 425 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002516181.1 | 0 | 1 | 486 | 16 | 500 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ghr_A | 0 | 27 | 345 | 1 | 305 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1aq0_B | 0 | 27 | 345 | 1 | 305 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 1aq0_A | 0 | 27 | 345 | 1 | 305 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 2cyg_A | 1.4013e-45 | 27 | 345 | 1 | 311 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_D | 1.96182e-44 | 27 | 345 | 2 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
