| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_006515m |
| Family | CBM43 |
| Protein Properties | Length: 486 Molecular Weight: 53702.1 Isoelectric Point: 8.2165 |
| Chromosome | Chromosome/Scaffold: 00450 Start: 104666 End: 108049 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 368 | 447 | 2.6e-25 |
| WCVVNNNKDLSNASTNAMDACSVADCTALSPGGSCFNISWPGNISYAFNSYYQQHDQRADSCDFGGLGLITTVDPSVGNC | |||
| GH17 | 25 | 348 | 0 |
| IGVNWGTTSSHPLPPLKVLELLKSNNISKVKLFDADPLVLQALSGSNIGVTVGIPNSMLKSFNSSKKVAESWVHDNVTRYFSSGSSGVRIEYIAVGDEPF HLSYGEQFHPFVTGAAINVQTALTRANLASQVKVVVPCSYDIIQSESGLPSKGHFRSDLNKTMIELLTFLRKHHSPFFVTISPFITFHKSKNISLDFALF KEAAHPRNDSHRIYKNSFDLSYDTLVTALSVVGFPEMNIVVAKIGWPTDGAANATSFISETFMKGLMDHVHSKSGTPLRPRNPPAETYIFSLLDEDQRSI ATGNFERHWGLFTFDGQAKYRIDF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 486 Download |
| MPPGLRFLFL FLATVCPLRS TAVAIGVNWG TTSSHPLPPL KVLELLKSNN ISKVKLFDAD 60 PLVLQALSGS NIGVTVGIPN SMLKSFNSSK KVAESWVHDN VTRYFSSGSS GVRIEYIAVG 120 DEPFHLSYGE QFHPFVTGAA INVQTALTRA NLASQVKVVV PCSYDIIQSE SGLPSKGHFR 180 SDLNKTMIEL LTFLRKHHSP FFVTISPFIT FHKSKNISLD FALFKEAAHP RNDSHRIYKN 240 SFDLSYDTLV TALSVVGFPE MNIVVAKIGW PTDGAANATS FISETFMKGL MDHVHSKSGT 300 PLRPRNPPAE TYIFSLLDED QRSIATGNFE RHWGLFTFDG QAKYRIDFGQ GLKKPENAKN 360 VEYLPSKWCV VNNNKDLSNA STNAMDACSV ADCTALSPGG SCFNISWPGN ISYAFNSYYQ 420 QHDQRADSCD FGGLGLITTV DPSVGNCRFS IELRTSHTVS LSGSYHFPWM ILLTVKSYFF 480 LLYFY* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.006 | 262 | 339 | 82 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 6.0e-16 | 367 | 435 | 79 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 3.0e-31 | 367 | 449 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-64 | 25 | 348 | 325 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABF95444.1 | 0 | 25 | 483 | 35 | 485 | Glycosyl hydrolases family 17 protein, expressed [Oryza sativa (japonica cultivar-group)] |
| EMBL | CBI28434.1 | 0 | 22 | 472 | 20 | 472 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_200656.2 | 0 | 20 | 469 | 21 | 464 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002269108.1 | 0 | 10 | 472 | 11 | 475 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002313970.1 | 0 | 21 | 477 | 18 | 474 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3f55_D | 0 | 25 | 348 | 2 | 315 | A Chain A, Structure Of The Complex Of A Mitotic Kinesin With Its Calcium Binding Regulator |
| PDB | 3f55_C | 0 | 25 | 348 | 2 | 315 | A Chain A, Structure Of The Complex Of A Mitotic Kinesin With Its Calcium Binding Regulator |
| PDB | 3f55_B | 0 | 25 | 348 | 2 | 315 | A Chain A, Structure Of The Complex Of A Mitotic Kinesin With Its Calcium Binding Regulator |
| PDB | 3f55_A | 0 | 25 | 348 | 2 | 315 | A Chain A, Structure Of The Complex Of A Mitotic Kinesin With Its Calcium Binding Regulator |
| PDB | 3em5_D | 0 | 25 | 348 | 2 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
