| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_006628m |
| Family | CBM43 |
| Protein Properties | Length: 482 Molecular Weight: 52171.1 Isoelectric Point: 5.4111 |
| Chromosome | Chromosome/Scaffold: 08517 Start: 88346 End: 92483 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 363 | 444 | 8e-25 |
| WCVMKPSAKIDDPNVAPSVSYACGLADCTSLGYGTSCGSLDTRGNISYALNSYYQIQNQLDSACKFENISMITKNDPSTGTC | |||
| GH17 | 23 | 341 | 0 |
| IGANWGTQATHPLPPDTVVRLLRDNGIQKVKLFDADYDTLRALGGSNIEVMVGIPNDMLLTLATSMKAAEKWVAKNVSTHISTNNVNIRYVAVGNEPFLQ TYNGSFLKTTYPALQNVQSALVKAGLSNQVKVTVPLNADVYESSTGVPSGGDFRADIHDLMITIVKFLSDSGSPFTVNIYPFISLYSDPNFPVEYAFFDG NATPLNDGGTSYYNMFDANYDTLAHALQKNGFGNLPIIVGEIGWPTDGDKNANGFYAQRFNQGFMSHIAGGKGTPMRPEPIDAYLFSLIDEDAKSIDPGN FERHWGIFTFDGRAKYALN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 482 Download |
| MGLFSVAVVL ISLLSVVSTV SGIGANWGTQ ATHPLPPDTV VRLLRDNGIQ KVKLFDADYD 60 TLRALGGSNI EVMVGIPNDM LLTLATSMKA AEKWVAKNVS THISTNNVNI RYVAVGNEPF 120 LQTYNGSFLK TTYPALQNVQ SALVKAGLSN QVKVTVPLNA DVYESSTGVP SGGDFRADIH 180 DLMITIVKFL SDSGSPFTVN IYPFISLYSD PNFPVEYAFF DGNATPLNDG GTSYYNMFDA 240 NYDTLAHALQ KNGFGNLPII VGEIGWPTDG DKNANGFYAQ RFNQGFMSHI AGGKGTPMRP 300 EPIDAYLFSL IDEDAKSIDP GNFERHWGIF TFDGRAKYAL NLGTTNSGVL IEAKNVHYLE 360 RKWCVMKPSA KIDDPNVAPS VSYACGLADC TSLGYGTSCG SLDTRGNISY ALNSYYQIQN 420 QLDSACKFEN ISMITKNDPS TGTCRFAIMI EAYYGGAERT VGCSQKALRL AAGLILFFLT 480 I* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 1.0e-5 | 255 | 333 | 80 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 2.0e-14 | 362 | 428 | 74 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 2.0e-29 | 362 | 446 | 87 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 3.0e-75 | 23 | 341 | 321 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI38945.1 | 0 | 1 | 481 | 1 | 482 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002273826.1 | 0 | 1 | 481 | 83 | 564 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002309034.1 | 0 | 23 | 462 | 4 | 444 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002331390.1 | 0 | 10 | 456 | 1 | 448 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002530371.1 | 0 | 1 | 481 | 1 | 481 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ghr_A | 0 | 23 | 342 | 1 | 306 | A Chain A, Tachylectin 5a From Tachypleus Tridentatus (Japanese Horseshoe Crab) |
| PDB | 1aq0_B | 0 | 23 | 342 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 1aq0_A | 0 | 23 | 342 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 3f55_D | 0 | 23 | 342 | 2 | 315 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 3f55_C | 0 | 23 | 342 | 2 | 315 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
