| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_006673m |
| Family | CBM43 |
| Protein Properties | Length: 480 Molecular Weight: 51741.1 Isoelectric Point: 4.8203 |
| Chromosome | Chromosome/Scaffold: 11521 Start: 152448 End: 155385 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 365 | 444 | 1.1e-24 |
| WCVADATKDLSGVANHMRIACGVADCSTLNYGGSCNGIGAKGNISYAFNSYYQLQDQNAQSCDFDGLGMVTFLDPSVGDC | |||
| GH17 | 26 | 344 | 0 |
| IGVNWGTVSFRKLKPSTVVDLLKDNNIEKVKLFDADPEVLGALMGSGIQVMVGIPNEMLAAISSSTAVSDLWVRQNVSRYVVKGGVDIRYVAVGNEPFLT SYSGQFQSYVIPALLNLQQSLAKANLAGYVKLVVPCNADAYESSLPSQGTYRPELTEIITQLLSFLSSNGSPFVVNIYPFLSLYGSTDFPQDYAFFDGST HPVTDGPNVYGNAFDGNFDTLVAALNKLGYGQMPIVIGEVGWPTDGAISANLTAAKAFNQGLIYHVLSNKGTPLRPGAPPMDVYIFSLLDEGAKSTLPGN FERHWGIFSFDGQAKYPLN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 480 Download |
| MSGFREAFLY VVILVLGSFL VAESAIGVNW GTVSFRKLKP STVVDLLKDN NIEKVKLFDA 60 DPEVLGALMG SGIQVMVGIP NEMLAAISSS TAVSDLWVRQ NVSRYVVKGG VDIRYVAVGN 120 EPFLTSYSGQ FQSYVIPALL NLQQSLAKAN LAGYVKLVVP CNADAYESSL PSQGTYRPEL 180 TEIITQLLSF LSSNGSPFVV NIYPFLSLYG STDFPQDYAF FDGSTHPVTD GPNVYGNAFD 240 GNFDTLVAAL NKLGYGQMPI VIGEVGWPTD GAISANLTAA KAFNQGLIYH VLSNKGTPLR 300 PGAPPMDVYI FSLLDEGAKS TLPGNFERHW GIFSFDGQAK YPLNLGLGNK ELKNAKNVEY 360 LPSRWCVADA TKDLSGVANH MRIACGVADC STLNYGGSCN GIGAKGNISY AFNSYYQLQD 420 QNAQSCDFDG LGMVTFLDPS VGDCRFLVGV TDTSSGFGPC PRRIMIWILM IWGLCVFLI* 480 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.001 | 256 | 336 | 81 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 1.0e-16 | 364 | 433 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 6.0e-29 | 365 | 446 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 5.0e-74 | 26 | 342 | 319 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAB10499.1 | 0 | 9 | 476 | 36 | 502 | glucanase like protein [Arabidopsis thaliana] |
| EMBL | CAN82722.1 | 0 | 21 | 452 | 1 | 432 | hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002271875.1 | 0 | 23 | 455 | 36 | 468 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002329964.1 | 0 | 1 | 479 | 4 | 484 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002525026.1 | 0 | 1 | 479 | 1 | 480 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ghr_A | 1.4013e-45 | 26 | 345 | 1 | 306 | A Chain A, Phosphorylase Recognition And Phosphorylysis Of Its Oligosaccharide Substrate: Answers To A Long Outstanding Question |
| PDB | 1aq0_B | 1.4013e-45 | 26 | 345 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 1aq0_A | 1.4013e-45 | 26 | 345 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 2cyg_A | 9.80909e-45 | 26 | 345 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_D | 1.96182e-44 | 41 | 345 | 17 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
