| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_006682m |
| Family | CBM43 |
| Protein Properties | Length: 480 Molecular Weight: 51862.2 Isoelectric Point: 4.6631 |
| Chromosome | Chromosome/Scaffold: 00621 Start: 127084 End: 129838 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 365 | 444 | 1.2e-24 |
| WCVADANKDLSGVTNHMRIACSVADCSTLNYGGSCNGIGAKGNISYAFNSYYQLQDQNAQSCDFDGLGMVTFLDPSVGDC | |||
| GH17 | 26 | 344 | 0 |
| IGVNWGTVSFRKLKPSTVVDLLKDNNIEKVKLFDADPEALGALMGSGIQVMVGIPNEMLAAISSSTAVSDLWVRQNVSRYLVKGGVDIRYVAVGNEPFLT SYSGQFQSYVIPALLNLQQSLAKANLAGYVKLVVPCNADAYESSLPSQGTFRPELTEIITQLLSFLSSNGSPFVVNIYPFLSLYGSTDFPQDYAFFDGST HPVTDGPNVYDNAFDGNFDTLVAALNKLGYGQMPIVIGEVGWPTDGAISANLTAAKAFNQGLIYHVLSNKGTPLRPGAPPMDVYIFSLLDEGAKSTLPGN FERHWGIFSFDGQAKYSLN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 480 Download |
| MSGFREAFLY VVILVLGSFL VAESAIGVNW GTVSFRKLKP STVVDLLKDN NIEKVKLFDA 60 DPEALGALMG SGIQVMVGIP NEMLAAISSS TAVSDLWVRQ NVSRYLVKGG VDIRYVAVGN 120 EPFLTSYSGQ FQSYVIPALL NLQQSLAKAN LAGYVKLVVP CNADAYESSL PSQGTFRPEL 180 TEIITQLLSF LSSNGSPFVV NIYPFLSLYG STDFPQDYAF FDGSTHPVTD GPNVYDNAFD 240 GNFDTLVAAL NKLGYGQMPI VIGEVGWPTD GAISANLTAA KAFNQGLIYH VLSNKGTPLR 300 PGAPPMDVYI FSLLDEGAKS TLPGNFERHW GIFSFDGQAK YSLNLGLGNK ELKNAKNVEY 360 LPSRWCVADA NKDLSGVTNH MRIACSVADC STLNYGGSCN GIGAKGNISY AFNSYYQLQD 420 QNAQSCDFDG LGMVTFLDPS VGDCRFLVGV TDTSSGFGPC PRWIMIWILM IWGLCVFLI* 480 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.002 | 256 | 336 | 81 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 7.0e-16 | 364 | 433 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 2.0e-28 | 365 | 446 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 1.0e-74 | 26 | 342 | 319 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAB10499.1 | 0 | 9 | 476 | 36 | 502 | glucanase like protein [Arabidopsis thaliana] |
| EMBL | CAN82722.1 | 0 | 21 | 452 | 1 | 432 | hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002271875.1 | 0 | 23 | 455 | 36 | 468 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002329964.1 | 0 | 1 | 479 | 4 | 484 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002525026.1 | 0 | 1 | 479 | 1 | 480 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 26 | 345 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1ghr_A | 0 | 26 | 345 | 1 | 306 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1aq0_B | 0 | 26 | 345 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 1aq0_A | 0 | 26 | 345 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 3f55_D | 4.2039e-45 | 41 | 345 | 17 | 315 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
