| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_006689m |
| Family | CBM43 |
| Protein Properties | Length: 479 Molecular Weight: 52593.8 Isoelectric Point: 4.9947 |
| Chromosome | Chromosome/Scaffold: 03614 Start: 1994743 End: 1998123 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 367 | 448 | 1.5e-24 |
| WCMFNPNAKDLSKLADNINYACTFSDCTALGYGSSCNVLDANGNASYAFNMYFQVQNQDPMACNFQGLAMVTSQNLSQGTCN | |||
| GH17 | 23 | 345 | 0 |
| LGVNWGTQATHKLPPKTVVQMLKDNGVQKVKLFDSDRTTMSALAGSGIEVMVAIPNDQLAAMNDYKRAQDFVKRNVSIYNFNGGVNIKYVAVGNEPFLTS YNGTFVNLTFPALQNIQNALNEADLGDSIKATVPLNADIYNSPDDQPYPSAGRFRTDISDVMTQIVQFLNKNNAPFTVNIYPFLSLYGNDNFPINYAFFD GASQPIVDKATGIQYTNVFDANFDTLVSALKAVGFGQMPIIVGEVGWPTDGDKSATIDYAYRFYNGLLPRLASNRGTPLRPGFIEVYLFGLLDEDAKSIA PGNFERHWGIFRYDGQPKFALDF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 479 Download |
| MGSSWFLMWI LLLGLLGTRV YGLGVNWGTQ ATHKLPPKTV VQMLKDNGVQ KVKLFDSDRT 60 TMSALAGSGI EVMVAIPNDQ LAAMNDYKRA QDFVKRNVSI YNFNGGVNIK YVAVGNEPFL 120 TSYNGTFVNL TFPALQNIQN ALNEADLGDS IKATVPLNAD IYNSPDDQPY PSAGRFRTDI 180 SDVMTQIVQF LNKNNAPFTV NIYPFLSLYG NDNFPINYAF FDGASQPIVD KATGIQYTNV 240 FDANFDTLVS ALKAVGFGQM PIIVGEVGWP TDGDKSATID YAYRFYNGLL PRLASNRGTP 300 LRPGFIEVYL FGLLDEDAKS IAPGNFERHW GIFRYDGQPK FALDFTGQGQ NKLPVGAQNV 360 QYQPSKWCMF NPNAKDLSKL ADNINYACTF SDCTALGYGS SCNVLDANGN ASYAFNMYFQ 420 VQNQDPMACN FQGLAMVTSQ NLSQGTCNFM IQIASAASLV RSLLLSLAFV TVLTLFML* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00925 | GTP_cyclohydro2 | 0.006 | 42 | 77 | 36 | + GTP cyclohydrolase II. GTP cyclohydrolase II catalyzes the first committed step in the biosynthesis of riboflavin. | ||
| COG5309 | COG5309 | 0.0003 | 252 | 336 | 89 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 3.0e-17 | 366 | 436 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 2.0e-30 | 366 | 449 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 1.0e-70 | 25 | 345 | 324 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAQ90287.1 | 0 | 20 | 478 | 25 | 480 | beta-1,3-glucanase, acidic [Coffea arabica] |
| RefSeq | XP_002277003.1 | 0 | 5 | 453 | 6 | 453 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002319699.1 | 0 | 1 | 478 | 1 | 477 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002325410.1 | 0 | 1 | 477 | 1 | 508 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002525445.1 | 0 | 1 | 458 | 1 | 458 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3f55_D | 0 | 23 | 346 | 2 | 316 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3f55_C | 0 | 23 | 346 | 2 | 316 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3f55_B | 0 | 23 | 346 | 2 | 316 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3f55_A | 0 | 23 | 346 | 2 | 316 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3em5_D | 0 | 23 | 346 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
