y
Basic Information | |
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Species | Manihot esculenta |
Cazyme ID | cassava4.1_006863m |
Family | CBM43 |
Protein Properties | Length: 474 Molecular Weight: 51295.9 Isoelectric Point: 4.6146 |
Chromosome | Chromosome/Scaffold: 03332 Start: 64653 End: 66960 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 385 | 468 | 2.3e-34 |
WCVASGNVGTDKLQDAIDYACGEGGADCRPIQPGATCYNPNTLEAHASYAFNSYYQKKARGAGTCDFGGAAYVVTQPPRFGNCE | |||
GH17 | 29 | 345 | 0 |
IGINYGRVANDLPTPDKVVELLKSQGINRIKLYDTDSTVLTALANSGISVVVALPNELLASTATDQSFADKWVQANISQYYPKTQIEAIAVGNEVFVDPK NTTKFLVPAMKNVYNSLVKLNLSSIKISSPIALSALQNSYPSSAGSFKPELIEPVMKPMLEFLRQSNSYLMINAYPFFAYSANSKEISLDYTLFKENPGV VDSGNGLKYYSLLEAQLDAVFAAMSAIQYSDIKMVVTETGWPSLGDENEIGASEENAASYNGNLVNRVLTGNGTPLRPQDPLNVYLFALFNENQKPGPTS ERNYGLFYPNEQKVYNI |
Full Sequence |
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Protein Sequence Length: 474 Download |
MAMASFTFSL SCFLVLLSFF VFADAAGIIG INYGRVANDL PTPDKVVELL KSQGINRIKL 60 YDTDSTVLTA LANSGISVVV ALPNELLAST ATDQSFADKW VQANISQYYP KTQIEAIAVG 120 NEVFVDPKNT TKFLVPAMKN VYNSLVKLNL SSIKISSPIA LSALQNSYPS SAGSFKPELI 180 EPVMKPMLEF LRQSNSYLMI NAYPFFAYSA NSKEISLDYT LFKENPGVVD SGNGLKYYSL 240 LEAQLDAVFA AMSAIQYSDI KMVVTETGWP SLGDENEIGA SEENAASYNG NLVNRVLTGN 300 GTPLRPQDPL NVYLFALFNE NQKPGPTSER NYGLFYPNEQ KVYNIPLTLK ELENRQSTPV 360 NGNKSEVPVN GTSGEVSKTS VGQTWCVASG NVGTDKLQDA IDYACGEGGA DCRPIQPGAT 420 CYNPNTLEAH ASYAFNSYYQ KKARGAGTCD FGGAAYVVTQ PPRFGNCEFP TGY* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 8.0e-7 | 23 | 338 | 328 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 6.0e-27 | 384 | 456 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-41 | 384 | 469 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 2.0e-107 | 29 | 345 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAZ40342.1 | 0 | 22 | 473 | 16 | 468 | beta-1,3-glucanase 2 [Ziziphus jujuba] |
RefSeq | NP_568822.1 | 0 | 20 | 473 | 19 | 460 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002278044.1 | 0 | 3 | 473 | 1 | 471 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002316783.1 | 0 | 26 | 473 | 1 | 449 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002529472.1 | 0 | 2 | 473 | 4 | 472 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghs_B | 0 | 29 | 345 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 29 | 345 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 2cyg_A | 0 | 29 | 345 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghr_A | 0 | 29 | 345 | 1 | 304 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1aq0_B | 0 | 29 | 345 | 1 | 304 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |