| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_006972m |
| Family | CBM43 |
| Protein Properties | Length: 470 Molecular Weight: 51006.8 Isoelectric Point: 5.8223 |
| Chromosome | Chromosome/Scaffold: 05214 Start: 790532 End: 792630 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 381 | 464 | 4e-34 |
| WCVGNPEAGKEKLQAALDYACGEGGADCRPIQPGATCYDPNTVVAHASFAFNSYYQKKGREIGTCYFGGAAYIVTQAPKYGKCE | |||
| GH17 | 24 | 343 | 0 |
| IGVNYGRIADNIPSAVKVVQLLKSQGLERVKVFDADPTVLRALSGSGIKVTVDLPNELLYSAAKTQSFAFSWVQRNVASYYPSTQIEAIAVGNEVFVDPH NTTKLLIPAMKNIHQALVKLNLHSAIKVSSPIALSALQSSYPSSAGAFRSELVEPVFKPMLDFLRETGSFLMVNAYPFFAYESNSDVISLDYALFRENPG VVDSGNGLRYFSLFDAQIDAVFAALSALKYDDIKMVVTETGWPSKGDENEIGASVENAAAYNGNLVRRILTGGGTPLRPKADLTVYLFALFNEDEKNGPT SERNYGLFYPNEQKVYDIPF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 470 Download |
| MERSFISYLL LLLCIFTFSD AGSIGVNYGR IADNIPSAVK VVQLLKSQGL ERVKVFDADP 60 TVLRALSGSG IKVTVDLPNE LLYSAAKTQS FAFSWVQRNV ASYYPSTQIE AIAVGNEVFV 120 DPHNTTKLLI PAMKNIHQAL VKLNLHSAIK VSSPIALSAL QSSYPSSAGA FRSELVEPVF 180 KPMLDFLRET GSFLMVNAYP FFAYESNSDV ISLDYALFRE NPGVVDSGNG LRYFSLFDAQ 240 IDAVFAALSA LKYDDIKMVV TETGWPSKGD ENEIGASVEN AAAYNGNLVR RILTGGGTPL 300 RPKADLTVYL FALFNEDEKN GPTSERNYGL FYPNEQKVYD IPFTVEGLKN YTDRRSPVSG 360 GQKVNPPVNG GVSKSTTGNT WCVGNPEAGK EKLQAALDYA CGEGGADCRP IQPGATCYDP 420 NTVVAHASFA FNSYYQKKGR EIGTCYFGGA AYIVTQAPKY GKCEFPTGY* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 1.0e-5 | 196 | 334 | 150 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 6.0e-25 | 380 | 452 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 8.0e-42 | 380 | 465 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-105 | 24 | 343 | 320 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_178637.2 | 0 | 20 | 469 | 21 | 472 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002274828.1 | 0 | 1 | 469 | 1 | 471 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002302861.1 | 0 | 1 | 469 | 1 | 470 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002333242.1 | 0 | 15 | 469 | 15 | 470 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002525335.1 | 0 | 19 | 458 | 19 | 458 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 24 | 343 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1ghs_B | 0 | 24 | 343 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 0 | 24 | 343 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3f55_D | 0 | 24 | 344 | 2 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3f55_C | 0 | 24 | 344 | 2 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
