| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_006981m |
| Family | CBM43 |
| Protein Properties | Length: 470 Molecular Weight: 51301.2 Isoelectric Point: 6.1657 |
| Chromosome | Chromosome/Scaffold: 03667 Start: 19296 End: 21411 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 381 | 464 | 6e-34 |
| WCMANQDVGKEKLQAALDYACGEGGADCRSIQPGATCYDPNTIEAHASYAFNSYYQKKGRDIGACYFGGAAYVVTQVPKYGQCE | |||
| GH17 | 24 | 343 | 0 |
| IGVNYGRIANNLPSAVKVVQLLKSQGLGRVKVFDTDPAVLRALSGSGIKVTVDLPNELLYSAAKRMSFAFSWVQRNVVAYYPSTQIEAIAVGNEVFVDPH NTTKFLIPAMKNIHQALVKLNLHSAIKISSPIALSALQSSYPSSAGAFRPEFIEPVFKPMLDFLRETGSYLMVNAYPFFAYESNSDVISLDYALFRENPG VVDPGNGLRYFNLFDAQIDAVFAAMSALKYDDIRMVVTETGWPSKGDENEIGATIQNAAAYNGNLVRRILTGGGTPLRPKADLTVYLFALFNEDEKNGPT SERNYGLFYPNEQKVYNIPF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 470 Download |
| MERSFIFYLL LLLCIFSFAD AGSIGVNYGR IANNLPSAVK VVQLLKSQGL GRVKVFDTDP 60 AVLRALSGSG IKVTVDLPNE LLYSAAKRMS FAFSWVQRNV VAYYPSTQIE AIAVGNEVFV 120 DPHNTTKFLI PAMKNIHQAL VKLNLHSAIK ISSPIALSAL QSSYPSSAGA FRPEFIEPVF 180 KPMLDFLRET GSYLMVNAYP FFAYESNSDV ISLDYALFRE NPGVVDPGNG LRYFNLFDAQ 240 IDAVFAAMSA LKYDDIRMVV TETGWPSKGD ENEIGATIQN AAAYNGNLVR RILTGGGTPL 300 RPKADLTVYL FALFNEDEKN GPTSERNYGL FYPNEQKVYN IPFTVEGLKD YKDSRSSVSG 360 GQQVTTPVVG GVSKSTTGNT WCMANQDVGK EKLQAALDYA CGEGGADCRS IQPGATCYDP 420 NTIEAHASYA FNSYYQKKGR DIGACYFGGA AYVVTQVPKY GQCEFPTGY* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.0008 | 196 | 334 | 150 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 8.0e-25 | 380 | 452 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 8.0e-41 | 380 | 465 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 7.0e-108 | 24 | 343 | 320 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_178637.2 | 0 | 20 | 469 | 21 | 472 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002274828.1 | 0 | 1 | 469 | 1 | 471 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002302861.1 | 0 | 1 | 469 | 1 | 470 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002333242.1 | 0 | 15 | 469 | 15 | 470 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002525335.1 | 0 | 19 | 458 | 19 | 458 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 24 | 343 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1ghs_B | 0 | 24 | 343 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 0 | 24 | 343 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3f55_D | 0 | 24 | 344 | 2 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3f55_C | 0 | 24 | 344 | 2 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
