| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_007070m |
| Family | CBM43 |
| Protein Properties | Length: 467 Molecular Weight: 51648.3 Isoelectric Point: 9.2079 |
| Chromosome | Chromosome/Scaffold: 07528 Start: 49713 End: 51438 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM43 | 376 | 459 | 3.4e-28 |
| WCVAGKGANKTALGDALSYACSQGNKTCEQIKPGKSCFKPDSLVWHASYSFSSYWAQFKKLGGTCYFNGLATQTAKDPSFGHCK | |||
| GH17 | 27 | 348 | 0 |
| VGINWGGLGNNLPSPTRSVELIKSIGAKQIKIYNADPDILNALKNTDFVVSIMVPNEIIANISKSQYLSDRWVQTNVVPFYPEVKIRYLLVGNEILTNPD LGTWYNLVPAMRRIKSSLKTHKIHKVKVGTPSAMNVLESSFPPSSGTFRSDISAPIMKPMLQFLNRTKSFFFVDVYPYFAWADNSKDINLDYALLESTNV TYTDPVTNLTYTNLFDQMLDAIVFAMKRLGYPDIRIFIAETGWPNNGDLDQIGANIYNAATYNRNIVKKLTTKPAIGTPARPGSVIPSFIFALYNENQKP GPGTERHFGLLYPNGSQVYEID | |||
| Full Sequence |
|---|
| Protein Sequence Length: 467 Download |
| MTVMDFVPLF IFALVVSVCS AEISSKVGIN WGGLGNNLPS PTRSVELIKS IGAKQIKIYN 60 ADPDILNALK NTDFVVSIMV PNEIIANISK SQYLSDRWVQ TNVVPFYPEV KIRYLLVGNE 120 ILTNPDLGTW YNLVPAMRRI KSSLKTHKIH KVKVGTPSAM NVLESSFPPS SGTFRSDISA 180 PIMKPMLQFL NRTKSFFFVD VYPYFAWADN SKDINLDYAL LESTNVTYTD PVTNLTYTNL 240 FDQMLDAIVF AMKRLGYPDI RIFIAETGWP NNGDLDQIGA NIYNAATYNR NIVKKLTTKP 300 AIGTPARPGS VIPSFIFALY NENQKPGPGT ERHFGLLYPN GSQVYEIDLS GKTPESEYTK 360 PLPAPTNNEP YKGKIWCVAG KGANKTALGD ALSYACSQGN KTCEQIKPGK SCFKPDSLVW 420 HASYSFSSYW AQFKKLGGTC YFNGLATQTA KDPSFGHCKF PSVSLL* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 5.0e-17 | 376 | 447 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 4.0e-34 | 376 | 460 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 1.0e-107 | 27 | 348 | 323 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAA89481.1 | 0 | 7 | 465 | 16 | 478 | beta-1,3-glucanase [Salix gilgiana] |
| EMBL | CBI39470.1 | 0 | 9 | 465 | 11 | 467 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002303070.1 | 0 | 9 | 465 | 5 | 461 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002334812.1 | 0 | 1 | 465 | 1 | 465 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002534357.1 | 0 | 79 | 466 | 1 | 388 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 27 | 349 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1ghs_B | 0 | 27 | 349 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 0 | 27 | 349 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghr_A | 0 | 27 | 349 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1aq0_B | 0 | 27 | 349 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
