| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_007097m |
| Family | CBM43 |
| Protein Properties | Length: 466 Molecular Weight: 49948.4 Isoelectric Point: 5.11 |
| Chromosome | Chromosome/Scaffold: 10173 Start: 1028258 End: 1030361 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 328 | 409 | 1.1e-31 |
| CVSKEGVDPKMLQAALDWACGPGKVDCSPLLQGQPCYEPDNVVAHSTYAFNAYFQEMDKSPGTCDFKGVATITTTDPSYGSC | |||
| GH17 | 2 | 309 | 0 |
| PSPTQVVALLKAQNIRHVRLYDADQAMLLALANTGIRVSVSVPNEQLLGIGQSNATAANWVARNVIVHVPATNITAIAVGSEVLTTIPNAAPVLVSALKF IHSALVASNLDGQIKVSTPHSSSIILDSFPPSQAFFNRTWDPVMVSLLKFLQSTGSYLMLNVYPYYDYMQSNGVIPLDYALFRPLPPNKEAVDANTLLHY TNVFDAVVDAAYFAMSYLNFTNIPIVVTESGWPSEGDSNEPYATIDNANTYNSNLIRHVLNNSGTPKHPGIAVSTYIYELYNEDLRTGPVSEKKWGLFDA NGVPVYVL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 466 Download |
| MPSPTQVVAL LKAQNIRHVR LYDADQAMLL ALANTGIRVS VSVPNEQLLG IGQSNATAAN 60 WVARNVIVHV PATNITAIAV GSEVLTTIPN AAPVLVSALK FIHSALVASN LDGQIKVSTP 120 HSSSIILDSF PPSQAFFNRT WDPVMVSLLK FLQSTGSYLM LNVYPYYDYM QSNGVIPLDY 180 ALFRPLPPNK EAVDANTLLH YTNVFDAVVD AAYFAMSYLN FTNIPIVVTE SGWPSEGDSN 240 EPYATIDNAN TYNSNLIRHV LNNSGTPKHP GIAVSTYIYE LYNEDLRTGP VSEKKWGLFD 300 ANGVPVYVLH LTGAGTVLAN DTTNQTFCVS KEGVDPKMLQ AALDWACGPG KVDCSPLLQG 360 QPCYEPDNVV AHSTYAFNAY FQEMDKSPGT CDFKGVATIT TTDPSYGSCR FPGSAGTNGT 420 LTNTTSLAPS SNSTSSDSPP LHLHNIGSFT TSAIIGAFLM SAVFL* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 6.0e-6 | 222 | 302 | 84 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 5.0e-20 | 326 | 398 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 1.0e-41 | 326 | 411 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 4.0e-79 | 2 | 307 | 306 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI26850.1 | 0 | 1 | 429 | 34 | 462 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002312452.1 | 0 | 1 | 465 | 15 | 479 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002314794.1 | 0 | 1 | 465 | 29 | 493 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002527772.1 | 0 | 1 | 451 | 34 | 484 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| RefSeq | XP_002531922.1 | 0 | 1 | 465 | 45 | 508 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 1 | 311 | 12 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_B | 0 | 1 | 312 | 14 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_A | 0 | 1 | 312 | 14 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur7_B | 0 | 1 | 312 | 14 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 0 | 1 | 312 | 14 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DR951683 | 294 | 33 | 326 | 0 |
| EX302541 | 294 | 1 | 294 | 0 |
| GE476981 | 314 | 61 | 374 | 0 |
| DK466504 | 289 | 3 | 291 | 0 |
| GO371467 | 294 | 119 | 412 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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