Basic Information | |
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Species | Manihot esculenta |
Cazyme ID | cassava4.1_007157m |
Family | CBM43 |
Protein Properties | Length: 464 Molecular Weight: 49084.7 Isoelectric Point: 5.4146 |
Chromosome | Chromosome/Scaffold: 06683 Start: 529563 End: 531944 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 375 | 457 | 3.1e-32 |
WCVPKAGVSDAQLQSNLDYACGRGIDCSPIQPGGVCFEPNTVASHAAYAMNLLYQNSDRSPGNCDFSQTGTLSSKNPSYDACN | |||
GH17 | 27 | 343 | 0 |
IGVNYGQVASNLPPPSATAKLLQSTLIEKVRLYGSDPALIKALAGTGIGITIGASNADIPSLASDPNFAKNWVDTNVVPFYPASKIILITVGNEVMSSGD KNLMTKLLPAIQNVQNALNAASLGGKIKVSTVHSMAVLKQSDPPSTGSFDPSFGDLMKGLLGFNNATGSPFAINPYPYFAYKSDPRTETLAFCLFQPNMG RVDANTKIKYMNMFDAQLDAVHSALGSMGFKNVEIVVAETGWPYKGDDNEVGTSIEDAKAYNGNLIAHLRSMVGTPLMPGKSVDTYIFALYDEDLKPGPG SERSFGLFKPDLTMTYD |
Full Sequence |
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Protein Sequence Length: 464 Download |
MAVLHCTSAL LLLFLLQASI ANSEPFIGVN YGQVASNLPP PSATAKLLQS TLIEKVRLYG 60 SDPALIKALA GTGIGITIGA SNADIPSLAS DPNFAKNWVD TNVVPFYPAS KIILITVGNE 120 VMSSGDKNLM TKLLPAIQNV QNALNAASLG GKIKVSTVHS MAVLKQSDPP STGSFDPSFG 180 DLMKGLLGFN NATGSPFAIN PYPYFAYKSD PRTETLAFCL FQPNMGRVDA NTKIKYMNMF 240 DAQLDAVHSA LGSMGFKNVE IVVAETGWPY KGDDNEVGTS IEDAKAYNGN LIAHLRSMVG 300 TPLMPGKSVD TYIFALYDED LKPGPGSERS FGLFKPDLTM TYDAGLSKGQ TPSTPKTPET 360 PKPVTPTPVS NKETWCVPKA GVSDAQLQSN LDYACGRGID CSPIQPGGVC FEPNTVASHA 420 AYAMNLLYQN SDRSPGNCDF SQTGTLSSKN PSYDACNYPG GSA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 2.0e-7 | 103 | 337 | 238 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 2.0e-22 | 374 | 445 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-39 | 374 | 458 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 3.0e-88 | 27 | 343 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK95331.1 | 0 | 8 | 463 | 4 | 456 | unknown [Populus trichocarpa] |
EMBL | CBI32582.1 | 0 | 16 | 460 | 48 | 489 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002282736.1 | 0 | 1 | 461 | 1 | 463 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002284340.1 | 0 | 16 | 460 | 48 | 489 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002510373.1 | 0 | 1 | 463 | 1 | 461 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 27 | 343 | 1 | 309 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 27 | 347 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 27 | 347 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 27 | 347 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 27 | 347 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |