| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_007224m |
| Family | CBM43 |
| Protein Properties | Length: 461 Molecular Weight: 49277.6 Isoelectric Point: 4.8196 |
| Chromosome | Chromosome/Scaffold: 07296 Start: 49712 End: 51632 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 326 | 407 | 1.4e-30 |
| CAAKPNADSAKLQEGLNWACGQGGANCIAIQQGHPCYLPNTYQSHASYAYNDYFQKMRGAGGTCDFDGTAMTTTVDPSYGSC | |||
| GH17 | 2 | 310 | 0 |
| PSASDVVAMLKANQITHVRLYDADAHLLKDLANSGIEVMVGITNEEVLGIGESPAAAAAWINKNVASYMPSTNITAIAVGSEVLTSIPNAAAVLVPAMNY LHKALVASNLNFQVKVSTPQSMDVIPKPFPPSTATFNSTWNSTIYQVLQFLKNTNSYYMLNAYPYYGYTTGNGIFPIDYALFRPLPSVKQIVDPNTLSHY NSMFDAMVDATYYAIDAFNISGIPVIVTESGWPWVGGANEPDATVENAETFNNNLILRVLNNSGPPSQPTIPINTYIYELFNEDKRPGPVSEKNWGLFFP NGSAVYTLS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 461 Download |
| MPSASDVVAM LKANQITHVR LYDADAHLLK DLANSGIEVM VGITNEEVLG IGESPAAAAA 60 WINKNVASYM PSTNITAIAV GSEVLTSIPN AAAVLVPAMN YLHKALVASN LNFQVKVSTP 120 QSMDVIPKPF PPSTATFNST WNSTIYQVLQ FLKNTNSYYM LNAYPYYGYT TGNGIFPIDY 180 ALFRPLPSVK QIVDPNTLSH YNSMFDAMVD ATYYAIDAFN ISGIPVIVTE SGWPWVGGAN 240 EPDATVENAE TFNNNLILRV LNNSGPPSQP TIPINTYIYE LFNEDKRPGP VSEKNWGLFF 300 PNGSAVYTLS LSTSNRITKN SSVTYCAAKP NADSAKLQEG LNWACGQGGA NCIAIQQGHP 360 CYLPNTYQSH ASYAYNDYFQ KMRGAGGTCD FDGTAMTTTV DPSYGSCIFT GSSNLSTSGG 420 IFPPVSLGPI SPQGGSSSLS SETCKLQSLL SAALLALILL * 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.002 | 222 | 299 | 81 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 3.0e-18 | 324 | 396 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 1.0e-36 | 324 | 409 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-79 | 2 | 310 | 309 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB01763.1 | 0 | 1 | 437 | 1 | 438 | beta-1,3-glucanase-like protein [Arabidopsis thaliana] |
| EMBL | CAN72077.1 | 0 | 1 | 412 | 37 | 448 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_187965.1 | 0 | 1 | 437 | 37 | 474 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002283548.1 | 0 | 1 | 409 | 37 | 445 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002297638.1 | 0 | 1 | 460 | 1 | 461 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 1 | 311 | 12 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1ghs_B | 0 | 1 | 311 | 12 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 0 | 1 | 311 | 12 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3ur8_B | 0 | 1 | 312 | 14 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3ur8_A | 0 | 1 | 312 | 14 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DV150956 | 253 | 15 | 267 | 0 |
| BG648951 | 263 | 21 | 283 | 0 |
| DV154597 | 236 | 97 | 332 | 0 |
| DV161369 | 260 | 1 | 260 | 0 |
| FG991977 | 269 | 153 | 421 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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