| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_007302m |
| Family | CBM43 |
| Protein Properties | Length: 459 Molecular Weight: 48584.1 Isoelectric Point: 4.7308 |
| Chromosome | Chromosome/Scaffold: 04718 Start: 2411 End: 5812 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 370 | 451 | 9.1e-34 |
| WCMPKSGVSDAQLQGSLDYACGQGIDCSPIQPGGACFEPNTLVSHAAYAMNLYYQASGKSPWDCDFSQTAALTSTNPSYNSC | |||
| GH17 | 26 | 343 | 0 |
| IGINYGLVADNLPPPAATAKLLQSTAVQKVRLYGADPAILKALANTGIGIVIGASNGDIPALGSDPNSATQWVNSNVLPYYPASNIILITIGNEVVLSGD QNLISQLLPAMQNMENALKAASLGGKIKVSTVHSMAVLSQSDPPSSGLFNPSYQDTMRGLLQFQRDNGSPLAINPYPFFAYQSDPRPETLAFCLFQPNAG RVDSGNGILYMNMFDAQVDAVRSALNALGFKDIEILVAETGWPYRGDSNEVGPSIENARAYNGNLIAHLRSLVGTPLMPGKSVDTYLFAIYDEDLKPGPG SERAFGLFKPDLSMTYDV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 459 Download |
| MGLSRFILLC LLLQAFFSLA RSQSFIGINY GLVADNLPPP AATAKLLQST AVQKVRLYGA 60 DPAILKALAN TGIGIVIGAS NGDIPALGSD PNSATQWVNS NVLPYYPASN IILITIGNEV 120 VLSGDQNLIS QLLPAMQNME NALKAASLGG KIKVSTVHSM AVLSQSDPPS SGLFNPSYQD 180 TMRGLLQFQR DNGSPLAINP YPFFAYQSDP RPETLAFCLF QPNAGRVDSG NGILYMNMFD 240 AQVDAVRSAL NALGFKDIEI LVAETGWPYR GDSNEVGPSI ENARAYNGNL IAHLRSLVGT 300 PLMPGKSVDT YLFAIYDEDL KPGPGSERAF GLFKPDLSMT YDVGLSKSSL TPSTPQTPAT 360 PSVRPTGAAW CMPKSGVSDA QLQGSLDYAC GQGIDCSPIQ PGGACFEPNT LVSHAAYAMN 420 LYYQASGKSP WDCDFSQTAA LTSTNPSYNS CVYPGGST* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 6.0e-9 | 18 | 336 | 333 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 1.0e-23 | 370 | 439 | 75 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 4.0e-42 | 370 | 453 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 8.0e-97 | 26 | 343 | 318 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK95331.1 | 0 | 7 | 457 | 5 | 455 | unknown [Populus trichocarpa] |
| GenBank | ABK95837.1 | 0 | 1 | 458 | 1 | 452 | unknown [Populus trichocarpa] |
| EMBL | CBI32582.1 | 0 | 22 | 455 | 55 | 489 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002284340.1 | 0 | 22 | 455 | 55 | 489 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002509479.1 | 0 | 17 | 458 | 19 | 460 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 26 | 345 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1ghs_B | 0 | 26 | 343 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 0 | 26 | 343 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3ur8_B | 0 | 26 | 346 | 3 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3ur8_A | 0 | 26 | 346 | 3 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
