y
Basic Information | |
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Species | Manihot esculenta |
Cazyme ID | cassava4.1_007765m |
Family | GT43 |
Protein Properties | Length: 443 Molecular Weight: 50007.9 Isoelectric Point: 8.1628 |
Chromosome | Chromosome/Scaffold: 05899 Start: 78533 End: 81191 |
Description | Nucleotide-diphospho-sugar transferases superfamily protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT43 | 210 | 418 | 0 |
LAHTLKLVQPPLLWIVVEMTSQSEQTADILRRTGVMYRHLVCNKNLTDIKDRSVHQRNVALSHIENHHLDGIVYFADSGNIYSADLFEQMREIRRFGTWT VAKVTENKSQGILEGPICNGSRVVGWHVNESSRRFQRFHADMSGFAFNSTILWDPKRWHRPTLEPIRLFDTVRNNFQVSSFIEQVVEDESQMEGMLENCS RVMVWNLHL |
Full Sequence |
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Protein Sequence Length: 443 Download |
MASVRRTLSP VPRAGTLLNG EVCQVPSPLS KSSSSTQNFQ TTRGFFSSFL GLSDSQAFVL 60 GVFSPRSSRS LERSKPRGQV WRRAVFHFLV CFVVGIFVGL TPFVSMNLSA NLISKSQAFS 120 FEMVSTVGNF QTFEVMTTNR TSTTESELAE NNTAMEPEVK EVKLADVVSN HAPPINQSIP 180 EILDTAFQKL LIVVTPTNAQ PFQAYCLNRL AHTLKLVQPP LLWIVVEMTS QSEQTADILR 240 RTGVMYRHLV CNKNLTDIKD RSVHQRNVAL SHIENHHLDG IVYFADSGNI YSADLFEQMR 300 EIRRFGTWTV AKVTENKSQG ILEGPICNGS RVVGWHVNES SRRFQRFHAD MSGFAFNSTI 360 LWDPKRWHRP TLEPIRLFDT VRNNFQVSSF IEQVVEDESQ MEGMLENCSR VMVWNLHLES 420 SNSFYPPKWY TISNLDVTAQ LA* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03360 | Glyco_transf_43 | 2.0e-67 | 210 | 420 | 220 | + Glycosyltransferase family 43. | ||
PLN02458 | PLN02458 | 3.0e-91 | 70 | 421 | 372 | + transferase, transferring glycosyl groups | ||
cd00218 | GlcAT-I | 3.0e-94 | 189 | 419 | 237 | + Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43). |
Gene Ontology | |
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GO Term | Description |
GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU18893.1 | 0 | 1 | 441 | 1 | 430 | unknown [Glycine max] |
EMBL | CAN81600.1 | 0 | 188 | 442 | 11 | 265 | hypothetical protein [Vitis vinifera] |
EMBL | CBI20871.1 | 0 | 1 | 442 | 1 | 448 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002309550.1 | 0 | 1 | 442 | 1 | 442 | glycosyl transferase [Populus trichocarpa] |
RefSeq | XP_002516557.1 | 0 | 1 | 442 | 1 | 438 | beta-1,3-glucuronyltransferase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1v84_B | 1e-24 | 193 | 420 | 7 | 235 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
PDB | 1v84_A | 1e-24 | 193 | 420 | 7 | 235 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
PDB | 1v83_B | 1e-24 | 193 | 420 | 7 | 235 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
PDB | 1v83_A | 1e-24 | 193 | 420 | 7 | 235 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
PDB | 1v82_B | 1e-24 | 193 | 420 | 7 | 235 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |