| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_008068m |
| Family | GH5 |
| Protein Properties | Length: 432 Molecular Weight: 49840.5 Isoelectric Point: 6.5161 |
| Chromosome | Chromosome/Scaffold: 11689 Start: 464819 End: 469029 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH5 | 51 | 377 | 1.9e-35 |
| DGRPFYINGWNSYWLMDHSVEEDRKPRVSAMLEAGAKMGLTVCRTWAFNDGGYNALQVSPGRFDERVFKALDYVIAEARQHGIRLLLSLVNNLKPYGGKT QYVKWAWEEGVGLSSSNDSFFFDPTIKRYFKNYVKTLLTRKNTITGIEYRNDPSIFGWELMNEPRCMSDPSGDTLQDWIEEMSAFVKSIDKNHLLTVGLE GFYGPKNPKRLTVNPEDWASTFGSDFVRNSKVPDIDFASVHIYPDHWIQGRTFEEKLTFVSKWMLSHIEDGHYELGKPVFFTEYGFSNLNNDFQHSQRDQ FYKTILHIIYKSAKRKRAGAGALVWQF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 432 Download |
| MVAGNGLLYP ILGFASCVAF IYMSFGNLWL VYHEEPELPF VTRNGTQFML DGRPFYINGW 60 NSYWLMDHSV EEDRKPRVSA MLEAGAKMGL TVCRTWAFND GGYNALQVSP GRFDERVFKA 120 LDYVIAEARQ HGIRLLLSLV NNLKPYGGKT QYVKWAWEEG VGLSSSNDSF FFDPTIKRYF 180 KNYVKTLLTR KNTITGIEYR NDPSIFGWEL MNEPRCMSDP SGDTLQDWIE EMSAFVKSID 240 KNHLLTVGLE GFYGPKNPKR LTVNPEDWAS TFGSDFVRNS KVPDIDFASV HIYPDHWIQG 300 RTFEEKLTFV SKWMLSHIED GHYELGKPVF FTEYGFSNLN NDFQHSQRDQ FYKTILHIIY 360 KSAKRKRAGA GALVWQFFVQ GMEDFNDDFG IVPWEISSTY RSFIEQSCRL AKIQGTLLQN 420 QNFRELCLQS Q* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam12876 | Cellulase-like | 0.003 | 198 | 293 | 105 | + Sugar-binding cellulase-like. This is a putative cellulase family. | ||
| pfam11790 | Glyco_hydro_cc | 0.0005 | 267 | 357 | 91 | + Glycosyl hydrolase catalytic core. This family is probably a glycosyl hydrolase, and is conserved in fungi and some Proteobacteria. The pombe member is annotated as being from IPR013781. | ||
| COG2730 | BglC | 8.0e-5 | 86 | 335 | 271 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
| pfam00150 | Cellulase | 7.0e-8 | 51 | 344 | 299 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG3934 | COG3934 | 6.0e-29 | 48 | 398 | 351 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK95966.1 | 0 | 1 | 431 | 4 | 435 | unknown [Populus trichocarpa] |
| GenBank | ACN78665.1 | 0 | 1 | 431 | 13 | 443 | endo-beta-mannanase [Malus x domestica] |
| RefSeq | NP_179660.2 | 0 | 3 | 427 | 5 | 429 | glycosyl hydrolase family 5 protein / cellulase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002330687.1 | 0 | 1 | 431 | 4 | 435 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002517909.1 | 0 | 1 | 431 | 1 | 431 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1rh9_A | 0 | 40 | 413 | 6 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzq_A | 0 | 49 | 393 | 21 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzo_A | 0 | 49 | 393 | 21 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzn_A | 0 | 49 | 393 | 21 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzm_A | 0 | 49 | 393 | 21 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
