y
Basic Information | |
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Species | Manihot esculenta |
Cazyme ID | cassava4.1_008249m |
Family | CE8 |
Protein Properties | Length: 426 Molecular Weight: 46973 Isoelectric Point: 9.3379 |
Chromosome | Chromosome/Scaffold: 02871 Start: 558285 End: 560830 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 113 | 408 | 0 |
AIVAADGTGNFTKIMDAVSAAPDYSMGRYIIYIKKGFYNEYVDIKKKKWNLMMVGDGMGVTVISGNRSFIDGWTTFRSATFAVSGRGFIARDITFENTAG AAKHQAVALRSDSDLSVFYRCEIKGYQDTLYTHTMRQFYRECRISGTVDFIFGDATAVFQNCQILAKKGLPSQKNTITAQGRKDPNQPTGYSIQFCNISA DIDLLPVTSSTYTYLGRPWKNFSRTVVMQSYMSDAIRPEGWLEWNGDQFLDTLYYGEYSNYGPGAGLANRVRWPGYHILNTSNEASNYTVAVFIEG |
Full Sequence |
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Protein Sequence Length: 426 Download |
MSASQNPKGK HNSTGDLSSD LRTWLSAALV NQDTCIDGFE GTSSILKNLV AGGLNKITSS 60 VQQLLSKVDS KPNSKANGVA LTGRKTSQNH KFPSWVQHRD RKLLVINGVT PDAIVAADGT 120 GNFTKIMDAV SAAPDYSMGR YIIYIKKGFY NEYVDIKKKK WNLMMVGDGM GVTVISGNRS 180 FIDGWTTFRS ATFAVSGRGF IARDITFENT AGAAKHQAVA LRSDSDLSVF YRCEIKGYQD 240 TLYTHTMRQF YRECRISGTV DFIFGDATAV FQNCQILAKK GLPSQKNTIT AQGRKDPNQP 300 TGYSIQFCNI SADIDLLPVT SSTYTYLGRP WKNFSRTVVM QSYMSDAIRP EGWLEWNGDQ 360 FLDTLYYGEY SNYGPGAGLA NRVRWPGYHI LNTSNEASNY TVAVFIEGNL WLPSTGVKYT 420 AGLEV* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02484 | PLN02484 | 2.0e-170 | 13 | 425 | 421 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 8.0e-172 | 12 | 423 | 415 | + pectinesterase/pectinesterase inhibitor | ||
PLN02506 | PLN02506 | 3.0e-178 | 20 | 423 | 412 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02201 | PLN02201 | 0 | 1 | 425 | 428 | + probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 112 | 409 | 298 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK92470.1 | 0 | 1 | 425 | 104 | 528 | unknown [Populus trichocarpa] |
DDBJ | BAF42041.1 | 0 | 1 | 423 | 96 | 507 | pectin methylesterase 4 [Pyrus communis] |
EMBL | CBI29628.1 | 0 | 1 | 425 | 103 | 527 | unnamed protein product [Vitis vinifera] |
Swiss-Prot | Q43062 | 0 | 1 | 425 | 108 | 522 | PME_PRUPE RecName: Full=Pectinesterase/pectinesterase inhibitor PPE8B; Includes: RecName: Full=Pectinesterase inhibitor PPE8B; AltName: Full=Pectin methylesterase inhibitor PPE8B; Includes: RecName: Full=Pectinesterase PPE8B; Short=PE PPE8B; AltName: Full=Pectin methylesterase PPE8B; Flags: Precursor |
RefSeq | XP_002326321.1 | 0 | 1 | 425 | 96 | 520 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 109 | 423 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 109 | 423 | 5 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1qjv_B | 1e-24 | 123 | 384 | 18 | 318 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 1e-24 | 123 | 384 | 18 | 318 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 3e-24 | 123 | 384 | 18 | 318 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CV233766 | 274 | 153 | 426 | 0 |
DY290214 | 356 | 39 | 387 | 0 |
EX673765 | 293 | 136 | 426 | 0 |
DR937739 | 286 | 141 | 426 | 0 |
DT605043 | 270 | 143 | 412 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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