| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_008277m |
| Family | CBM43 |
| Protein Properties | Length: 425 Molecular Weight: 46198.7 Isoelectric Point: 4.6986 |
| Chromosome | Chromosome/Scaffold: 00847 Start: 314272 End: 316464 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 291 | 373 | 1.2e-31 |
| WCIASSNASQLDLQSALDWACGPGNVDCSAIQPSQPCFEPDTLLSHASYAFNSYYQQNGASDVACSFGGVGVKVDKDPSYDNC | |||
| GH17 | 1 | 269 | 0 |
| MVGIPNSDLLALSQFQSNADSWLKNSILPYYPATKITYITVGAEVTESPNNVSAQVVPAMHNVLTALKKAGLHKKIKVSSTHSLGILSRSFPPSAGAFNS SYAFFLKPMLEFLAENQSPFMINIYPYYAYRDSPNNVSLDYALFESSSEVIDPNTGLLYTNMFDAQVDALYFALMALNFRTIDVMVTETGWPSKGSPKEK AATPDNAQTYNTNLIRHVIDNSGTPARPGEELDVYIFSLFNENRKPGLESERNWGLFYPDQTSVYNLDF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 425 Download |
| MVGIPNSDLL ALSQFQSNAD SWLKNSILPY YPATKITYIT VGAEVTESPN NVSAQVVPAM 60 HNVLTALKKA GLHKKIKVSS THSLGILSRS FPPSAGAFNS SYAFFLKPML EFLAENQSPF 120 MINIYPYYAY RDSPNNVSLD YALFESSSEV IDPNTGLLYT NMFDAQVDAL YFALMALNFR 180 TIDVMVTETG WPSKGSPKEK AATPDNAQTY NTNLIRHVID NSGTPARPGE ELDVYIFSLF 240 NENRKPGLES ERNWGLFYPD QTSVYNLDFT GRGVVDVTKN TTFAGLNGTA WCIASSNASQ 300 LDLQSALDWA CGPGNVDCSA IQPSQPCFEP DTLLSHASYA FNSYYQQNGA SDVACSFGGV 360 GVKVDKDPSY DNCLYMTTGS NNKTGASNTT AMASIHSSSS SHNEVFVWAS SFLLMAYLAL 420 LNIA* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 4.0e-7 | 13 | 260 | 251 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 3.0e-21 | 291 | 362 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 2.0e-38 | 291 | 375 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 3.0e-96 | 1 | 269 | 269 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABD91576.1 | 0 | 1 | 391 | 77 | 470 | beta-1,3-glucanase [Medicago sativa] |
| GenBank | ABD91577.1 | 0 | 1 | 391 | 77 | 470 | beta-1,3-glucanase [Medicago sativa] |
| RefSeq | XP_002283473.1 | 0 | 1 | 421 | 76 | 494 | PREDICTED: similar to beta-1,3-glucanase [Vitis vinifera] |
| RefSeq | XP_002330523.1 | 0 | 1 | 379 | 77 | 455 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002514201.1 | 0 | 1 | 411 | 76 | 487 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 1 | 269 | 51 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_B | 0 | 1 | 269 | 53 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_A | 0 | 1 | 269 | 53 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur7_B | 0 | 1 | 269 | 53 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 0 | 1 | 269 | 53 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| Hydropathy |
|---|
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DR946401 | 291 | 54 | 344 | 0 |
| DT738192 | 284 | 45 | 328 | 0 |
| EE078272 | 265 | 65 | 329 | 0 |
| DT460508 | 272 | 122 | 393 | 0 |
| GR848751 | 253 | 100 | 352 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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