| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_009702m |
| Family | CE8 |
| Protein Properties | Length: 381 Molecular Weight: 41885 Isoelectric Point: 9.3305 |
| Chromosome | Chromosome/Scaffold: 00847 Start: 374543 End: 377452 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 83 | 374 | 0 |
| VVNKNPAAGDFTSIQDAIDSLPFINLVRVVIKVHAGVYTEKVSIPPLKSFITIEGAGADKTIVQWGDTAQTPGPKGQPMGTYSSATFAVNSPYFIAKNIT FKNTTPVPPPGAIGKQAVAFRISADTAAFLGCRFLGGQDTLYDHLGRHYYKDCYIEGSVDFIFGNGLSLFERCHVHAIAQYTGALTAQGRSSLLEDTGFS FVNCKVTGSGALYLGRAWGPFSRVVFAYTYMDNIIIPKGWYNWGDPTREMTVFYGQYKCTGPGADFAGRVSWSRELTDEEAKPFISLSFIDG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 381 Download |
| MSNSHHVLCI LFLLILLHNS GLSLGHTKGI RPRKSPVNLP TINETRVQFS EQQFMKWVKF 60 VGSLKHSLFK AGKNKLFPSY TLVVNKNPAA GDFTSIQDAI DSLPFINLVR VVIKVHAGVY 120 TEKVSIPPLK SFITIEGAGA DKTIVQWGDT AQTPGPKGQP MGTYSSATFA VNSPYFIAKN 180 ITFKNTTPVP PPGAIGKQAV AFRISADTAA FLGCRFLGGQ DTLYDHLGRH YYKDCYIEGS 240 VDFIFGNGLS LFERCHVHAI AQYTGALTAQ GRSSLLEDTG FSFVNCKVTG SGALYLGRAW 300 GPFSRVVFAY TYMDNIIIPK GWYNWGDPTR EMTVFYGQYK CTGPGADFAG RVSWSRELTD 360 EEAKPFISLS FIDGSEWIKL * 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02304 | PLN02304 | 3.0e-116 | 81 | 379 | 307 | + probable pectinesterase | ||
| PLN02432 | PLN02432 | 6.0e-118 | 91 | 379 | 289 | + putative pectinesterase | ||
| PLN02634 | PLN02634 | 7.0e-120 | 90 | 378 | 290 | + probable pectinesterase | ||
| PLN02665 | PLN02665 | 3.0e-120 | 81 | 378 | 300 | + pectinesterase family protein | ||
| PLN02682 | PLN02682 | 0 | 38 | 380 | 343 | + pectinesterase family protein | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN63186.1 | 0 | 1 | 380 | 1 | 379 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI27989.1 | 0 | 68 | 380 | 1 | 313 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_197474.1 | 0 | 26 | 380 | 29 | 383 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002330522.1 | 0 | 1 | 380 | 1 | 381 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002514210.1 | 0 | 1 | 380 | 1 | 383 | Pectinesterase PPE8B precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 83 | 379 | 9 | 309 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 5.04467e-44 | 91 | 379 | 13 | 305 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3uw0_A | 6e-30 | 80 | 366 | 31 | 352 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_B | 2e-20 | 79 | 366 | 3 | 328 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_A | 2e-20 | 79 | 366 | 3 | 328 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
