| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_010240m |
| Family | CE8 |
| Protein Properties | Length: 365 Molecular Weight: 40762.9 Isoelectric Point: 9.3857 |
| Chromosome | Chromosome/Scaffold: 11341 Start: 73919 End: 78120 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 63 | 354 | 0 |
| ITVDVNGSGEFRSVQTAVDSVKENNTQNVLILISAGYYIEKVVVPVTKPYITFQGAGRDVTFIEWHDRASDRGPNGQQLRTYRTASVTVFASYFSARNIS FKNTAPAPMPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIATRFGSIAAQNRNSPDEKTGFA FVRCRVTGTGPLYVGRAMGQYSRIVYSYTYFDDLVAHGGWDDWDHVSNKNKTAFFGVYKCWGPGAAKVRGVSWARELDYASAHKFLAKSFVN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 365 Download |
| MASLNSFMFL HFYFVLTLFL LHAPFLVTSS IYRYRFNSVN ATVSNNSTKQ HHKWVGPVGH 60 RVITVDVNGS GEFRSVQTAV DSVKENNTQN VLILISAGYY IEKVVVPVTK PYITFQGAGR 120 DVTFIEWHDR ASDRGPNGQQ LRTYRTASVT VFASYFSARN ISFKNTAPAP MPGMQGWQAA 180 AFRISGDKAY FSGCGFYGAQ DTLCDDAGRH YFKECYIEGS IDFIFGNGRS MYKDCELHSI 240 ATRFGSIAAQ NRNSPDEKTG FAFVRCRVTG TGPLYVGRAM GQYSRIVYSY TYFDDLVAHG 300 GWDDWDHVSN KNKTAFFGVY KCWGPGAAKV RGVSWARELD YASAHKFLAK SFVNGRHWIA 360 PSDA* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02665 | PLN02665 | 2.0e-103 | 61 | 361 | 303 | + pectinesterase family protein | ||
| PLN02304 | PLN02304 | 2.0e-104 | 62 | 364 | 311 | + probable pectinesterase | ||
| PLN02671 | PLN02671 | 6.0e-112 | 59 | 359 | 303 | + pectinesterase | ||
| PLN02682 | PLN02682 | 2.0e-132 | 53 | 361 | 323 | + pectinesterase family protein | ||
| PLN02634 | PLN02634 | 0 | 12 | 364 | 353 | + probable pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABD64977.1 | 0 | 1 | 364 | 1 | 360 | pectinesterase family protein [Brassica oleracea] |
| GenBank | ABD65006.1 | 0 | 39 | 364 | 16 | 344 | pectinesterase family protein [Brassica oleracea] |
| EMBL | CBI31927.1 | 0 | 9 | 364 | 4 | 349 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002266321.1 | 0 | 44 | 364 | 36 | 356 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002303355.1 | 0 | 48 | 361 | 1 | 314 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 7.00005e-41 | 58 | 359 | 5 | 308 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 2e-30 | 68 | 359 | 10 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3uw0_A | 5e-18 | 72 | 332 | 43 | 340 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 1qjv_B | 3e-16 | 73 | 239 | 18 | 192 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 3e-16 | 73 | 239 | 18 | 192 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
