| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_010249m |
| Family | CE8 |
| Protein Properties | Length: 365 Molecular Weight: 40251 Isoelectric Point: 9.8864 |
| Chromosome | Chromosome/Scaffold: 06512 Start: 676871 End: 678510 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 67 | 357 | 0 |
| VNKKLSSVDFRTVRKAVNSIPVVNNCRVVISIGAGTYREKVEIPASMAYITLEGAGADKTIIEWDDTADKMGQGGHQLGTFGSATFAVNSPYFIAKNITF KNKAPSPPSGALGKQAVALRISADTAAFIGCKFIGAQDTLYDHIGRHYFKESYIEGSVDFIFGNGLSLYENCHLHAVTNRFGALTAQKRGSLLQETGFSF VNCKVTGSGALYLGRAWGTFSRVVFAYTYMDKIITPRGWYNWGDKNREMTVFYGQYKCSGPGADFGGRVSWSRELTEQEAKPFISVNFIDG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 365 Download |
| MKLLFMLFLL ANNANSLLTP NGSNSNRFVT SEEAYLKWLK AKQSGSFKHA LFQKAKNRFK 60 PCLTIKVNKK LSSVDFRTVR KAVNSIPVVN NCRVVISIGA GTYREKVEIP ASMAYITLEG 120 AGADKTIIEW DDTADKMGQG GHQLGTFGSA TFAVNSPYFI AKNITFKNKA PSPPSGALGK 180 QAVALRISAD TAAFIGCKFI GAQDTLYDHI GRHYFKESYI EGSVDFIFGN GLSLYENCHL 240 HAVTNRFGAL TAQKRGSLLQ ETGFSFVNCK VTGSGALYLG RAWGTFSRVV FAYTYMDKII 300 TPRGWYNWGD KNREMTVFYG QYKCSGPGAD FGGRVSWSRE LTEQEAKPFI SVNFIDGHEW 360 LPSS* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02304 | PLN02304 | 2.0e-109 | 75 | 364 | 298 | + probable pectinesterase | ||
| PLN02432 | PLN02432 | 6.0e-110 | 75 | 361 | 287 | + putative pectinesterase | ||
| PLN02665 | PLN02665 | 1.0e-117 | 64 | 361 | 300 | + pectinesterase family protein | ||
| PLN02634 | PLN02634 | 1.0e-118 | 75 | 361 | 288 | + probable pectinesterase | ||
| PLN02682 | PLN02682 | 0 | 21 | 362 | 342 | + pectinesterase family protein | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI17409.1 | 0 | 14 | 361 | 16 | 361 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002266952.1 | 0 | 14 | 361 | 14 | 359 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002310842.1 | 0 | 35 | 364 | 13 | 339 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002330522.1 | 0 | 1 | 361 | 9 | 379 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002531506.1 | 0 | 11 | 364 | 14 | 367 | Pectinesterase-2 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 73 | 364 | 16 | 311 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 2.00386e-43 | 75 | 364 | 14 | 307 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3uw0_A | 1e-28 | 75 | 349 | 43 | 352 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_B | 7e-20 | 76 | 363 | 18 | 340 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_A | 7e-20 | 76 | 363 | 18 | 340 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
