| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_011788m |
| Family | CBM43 |
| Protein Properties | Length: 326 Molecular Weight: 35339.8 Isoelectric Point: 7.0477 |
| Chromosome | Chromosome/Scaffold: 01895 Start: 161004 End: 162524 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 238 | 320 | 2.8e-31 |
| WCVAKPHADETVLQAVLDFCCGPGGVDCRDIYESGNCFAPDKLHAHASFAMNAYYQIHGRNYWNCDFKGTGLVTFSDPSYGKC | |||
| GH17 | 1 | 210 | 0 |
| MQNLHAVLVARGLDRKIKITTPHSMAVLASSFPPSASSFATTLMPTMTSIVGFLAETGAPFMINAYPYFAYRDNPGSVDLQYALLGNVTGVRDPVGYVYN NMLDAQIDAVRSAINALGYGNQTVKITVSESGWPSKGNPGDKAATPDNAKTYNTRLIQRAQSNKGTPMKPKDNIEIFVFALFNENKKDGGVSERNFGIFN GDGSKVYDVD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 326 Download |
| MQNLHAVLVA RGLDRKIKIT TPHSMAVLAS SFPPSASSFA TTLMPTMTSI VGFLAETGAP 60 FMINAYPYFA YRDNPGSVDL QYALLGNVTG VRDPVGYVYN NMLDAQIDAV RSAINALGYG 120 NQTVKITVSE SGWPSKGNPG DKAATPDNAK TYNTRLIQRA QSNKGTPMKP KDNIEIFVFA 180 LFNENKKDGG VSERNFGIFN GDGSKVYDVD LSCQFCSNEG TAEFGEKMSS GVRGPSVWCV 240 AKPHADETVL QAVLDFCCGP GGVDCRDIYE SGNCFAPDKL HAHASFAMNA YYQIHGRNYW 300 NCDFKGTGLV TFSDPSYGKC RYPQQ* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 2.0e-5 | 123 | 202 | 83 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 2.0e-18 | 238 | 308 | 80 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 6.0e-36 | 238 | 322 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 5.0e-60 | 1 | 210 | 211 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI40742.1 | 0 | 1 | 325 | 160 | 485 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002272900.1 | 0 | 1 | 325 | 135 | 460 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002300634.1 | 0 | 1 | 211 | 131 | 341 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002307804.1 | 0 | 102 | 317 | 1 | 198 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002510704.1 | 0 | 1 | 325 | 134 | 458 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ghr_A | 8.96831e-44 | 1 | 211 | 106 | 306 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| PDB | 1aq0_B | 8.96831e-44 | 1 | 211 | 106 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 1aq0_A | 8.96831e-44 | 1 | 211 | 106 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 3ur8_B | 2.00386e-43 | 1 | 213 | 113 | 316 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 3ur8_A | 2.00386e-43 | 1 | 213 | 113 | 316 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| ES815503 | 278 | 51 | 326 | 0 |
| ES808244 | 291 | 11 | 299 | 0 |
| DW093697 | 284 | 41 | 322 | 0 |
| EC919905 | 264 | 64 | 326 | 0 |
| ES808244 | 27 | 300 | 326 | 0.000001 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
