y
Basic Information | |
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Species | Manihot esculenta |
Cazyme ID | cassava4.1_011945m |
Family | AA2 |
Protein Properties | Length: 322 Molecular Weight: 34548.5 Isoelectric Point: 8.3314 |
Chromosome | Chromosome/Scaffold: 03400 Start: 155671 End: 157359 |
Description | Peroxidase superfamily protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA2 | 36 | 305 | 0 |
VESIVRTTVETHFRSNPTIAPGLLRMHFHDCFVHGCDASILIDGANSEKTAGPNLPLRGFEVIDDAKSKLEAACPGVVSCADILALAARDSVVLTRGPTW PVPTGRRDGRVSLASDTANLPGFTDSIDVQKQKFAALGLNTQDLVTLVGGHTIGATACQFFRYRLYNFSGNGADPSIDPAFVPQLQALCPQNGDASKRIA LDTGSSNTFDSTFFSNLRNGRGILESDQKLWTDATTRTFVQRFLGIRGLLGLTFNVEFARSMVKMSNIGV |
Full Sequence |
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Protein Sequence Length: 322 Download |
MGMQLLAFLL LTCMVATMVQ GQGTRVGFYS SSCPRVESIV RTTVETHFRS NPTIAPGLLR 60 MHFHDCFVHG CDASILIDGA NSEKTAGPNL PLRGFEVIDD AKSKLEAACP GVVSCADILA 120 LAARDSVVLT RGPTWPVPTG RRDGRVSLAS DTANLPGFTD SIDVQKQKFA ALGLNTQDLV 180 TLVGGHTIGA TACQFFRYRL YNFSGNGADP SIDPAFVPQL QALCPQNGDA SKRIALDTGS 240 SNTFDSTFFS NLRNGRGILE SDQKLWTDAT TRTFVQRFLG IRGLLGLTFN VEFARSMVKM 300 SNIGVKTGSN GEIRKICTAI N* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00141 | peroxidase | 0.007 | 252 | 278 | 27 | + Peroxidase. | ||
cd00314 | plant_peroxidase_like | 5.0e-28 | 38 | 302 | 281 | + Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised of classic extracellular plant peroxidases, like horseradish peroxidase. | ||
pfam00141 | peroxidase | 5.0e-71 | 40 | 188 | 150 | + Peroxidase. | ||
cd00693 | secretory_peroxidase | 2.0e-165 | 25 | 320 | 300 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. | ||
PLN03030 | PLN03030 | 0 | 5 | 321 | 319 | + cationic peroxidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004601 | peroxidase activity |
GO:0006979 | response to oxidative stress |
GO:0020037 | heme binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAL93154.1 | 0 | 5 | 321 | 10 | 328 | AF485268_1 bacterial-induced class III peroxidase [Gossypium hirsutum] |
GenBank | ACN97186.1 | 0 | 5 | 321 | 6 | 324 | peroxidase [Populus trichocarpa] |
DDBJ | BAE16616.1 | 0 | 1 | 321 | 1 | 324 | peroxidase [Populus alba] |
RefSeq | XP_002323611.1 | 0 | 17 | 321 | 5 | 311 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002528494.1 | 0 | 1 | 321 | 1 | 324 | Cationic peroxidase 2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1qo4_A | 0 | 28 | 321 | 7 | 304 | A Chain A, Bacillus Subtilis Pectate Lyase |
PDB | 1pa2_A | 0 | 28 | 321 | 7 | 304 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
PDB | 1qgj_B | 0 | 28 | 321 | 6 | 299 | A Chain A, Arabidopsis Thaliana Peroxidase N |
PDB | 1qgj_A | 0 | 28 | 321 | 6 | 299 | A Chain A, Arabidopsis Thaliana Peroxidase N |
PDB | 4a5g_B | 0 | 28 | 321 | 8 | 305 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
betanidin degradation | RXN-8635 | EC-1.11.1.7 | peroxidase |