| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_011952m |
| Family | GH33 |
| Protein Properties | Length: 322 Molecular Weight: 35970.9 Isoelectric Point: 4.8527 |
| Chromosome | Chromosome/Scaffold: 04829 Start: 76259 End: 80237 |
| Description | BNR/Asp-box repeat family protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH33 | 19 | 310 | 1.3e-28 |
| ASSAPFKNCHASTIVEVDKDHFLVAYFGGTLEGAPDVKIWLQTYKDGTWQSPVIVDEQSEVPMWNPVLFKLPSEELLLFYKIGQEVQKWSGCLKRSYDKG ITWTEREQLPPGILGPSKNKPTLLENGLLLCGSSVESWNSWGAWMEVTADAGRSWRKYGPIYIENTPLSVIQPVPFQTANGTLRVLLRSFEGIGKICMSE SYDGGLNWGYAIPMELPNPNSGIDGVKLSDGRILLAYNTISRGVLKVAVSEDDGDSWYDVITLEENPEMEFSYPAVIQASDGSIHISYTYNR | |||
| Full Sequence |
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| Protein Sequence Length: 322 Download |
| MRKDCHIRGP LKEEFTFPAS SAPFKNCHAS TIVEVDKDHF LVAYFGGTLE GAPDVKIWLQ 60 TYKDGTWQSP VIVDEQSEVP MWNPVLFKLP SEELLLFYKI GQEVQKWSGC LKRSYDKGIT 120 WTEREQLPPG ILGPSKNKPT LLENGLLLCG SSVESWNSWG AWMEVTADAG RSWRKYGPIY 180 IENTPLSVIQ PVPFQTANGT LRVLLRSFEG IGKICMSESY DGGLNWGYAI PMELPNPNSG 240 IDGVKLSDGR ILLAYNTISR GVLKVAVSED DGDSWYDVIT LEENPEMEFS YPAVIQASDG 300 SIHISYTYNR TQIKHVVLQP N* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00260 | Sialidase | 0.0003 | 66 | 286 | 258 | + Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases. | ||
| COG4692 | COG4692 | 9.0e-31 | 18 | 320 | 362 | + Predicted neuraminidase (sialidase) [Carbohydrate transport and metabolism] | ||
| pfam13088 | BNR_2 | 6.0e-94 | 38 | 304 | 282 | + BNR repeat-like domain. This family of proteins contains BNR-like repeats suggesting these proteins may act as sialidases. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM61202.1 | 0 | 11 | 319 | 9 | 317 | unknown [Arabidopsis thaliana] |
| GenBank | ACU18568.1 | 0 | 1 | 321 | 34 | 354 | unknown [Glycine max] |
| RefSeq | XP_002263578.1 | 0 | 4 | 321 | 52 | 369 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002324495.1 | 0 | 1 | 321 | 1 | 321 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002531744.1 | 0 | 1 | 321 | 1 | 321 | conserved hypothetical protein [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| DV137355 | 268 | 40 | 307 | 0 |
| EL689016 | 287 | 19 | 305 | 0 |
| DV145816 | 255 | 37 | 291 | 0 |
| EE258658 | 239 | 1 | 239 | 0 |
| CV274814 | 246 | 75 | 320 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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