| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_012088m |
| Family | CBM43 |
| Protein Properties | Length: 318 Molecular Weight: 34411.9 Isoelectric Point: 7.3853 |
| Chromosome | Chromosome/Scaffold: 03120 Start: 264865 End: 266028 |
| Description | Carbohydrate-binding X8 domain superfamily protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 231 | 309 | 6.6e-32 |
| WCVAKPSVPDPIIQEAMNYACASGADCGSIQPNGPCFQPNTLFAHASYAFNSYWQRTKVAGGTCSFGGTAMLVTVDPSK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 318 Download |
| MERNTPFYFS RVSLAILLLL LAIAAINCEA RKSMHLLRGQ MHTRSSIIQH IEKFKVTKHF 60 DLASLLLQKE TMNPSSTSPY VSSPFTLPPY DSLPPIPLPE NAPPNCIYPP NTPLPPSTTI 120 PTPNLSPPSS PFSYIPPFLP IPSPPPSPIG IVPSPPETTP FPNPPEFVPS PPTLIPGPPE 180 IVPSPITYIP SPPYPEFSPP SYIPSPFLPP VVYPPPTVPP PPRTVPQQAL WCVAKPSVPD 240 PIIQEAMNYA CASGADCGSI QPNGPCFQPN TLFAHASYAF NSYWQRTKVA GGTCSFGGTA 300 MLVTVDPSKL LFFFLFN* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 2.0e-25 | 230 | 301 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 1.0e-39 | 230 | 308 | 79 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN78496.1 | 0 | 2 | 317 | 4 | 262 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI34142.1 | 0 | 9 | 317 | 2 | 253 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002264966.1 | 0 | 1 | 316 | 1 | 367 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002312230.1 | 0 | 72 | 311 | 1 | 295 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002516415.1 | 0 | 72 | 317 | 1 | 263 | conserved hypothetical protein [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 2e-18 | 231 | 308 | 13 | 90 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
