| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_012403m |
| Family | AA1 |
| Protein Properties | Length: 310 Molecular Weight: 34062.8 Isoelectric Point: 7.4614 |
| Chromosome | Chromosome/Scaffold: 05009 Start: 116332 End: 118311 |
| Description | laccase 5 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 3 | 297 | 0 |
| GPGQTTDVLISGDQPPARYYIAARAYQSAQNAPFDNTTTTAILEYNSAPCPAKCLTSNPIMPQLPAFNDTNTVTAFSQSLKSPRKVEVPTEIDESLFFTI GLGLNRCPKNFRPRRCQGPNGTRFTSSMNNVSFVFPSSFSLLQAYQQNIPGVFTTDFPATPPVKFDYTGNVSRSLWQPATGTKLYKLKYGSRVQIVLQDT SIVTPENHPIHLHGYDFYIIAEGFGNFNPKTDTAKFNLVDPPMRNTVAVPSNGWAVIRFVADNPGVWIMHCHLDVHITWGLAMAFLVEDGVGKLQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 310 Download |
| MLGPGQTTDV LISGDQPPAR YYIAARAYQS AQNAPFDNTT TTAILEYNSA PCPAKCLTSN 60 PIMPQLPAFN DTNTVTAFSQ SLKSPRKVEV PTEIDESLFF TIGLGLNRCP KNFRPRRCQG 120 PNGTRFTSSM NNVSFVFPSS FSLLQAYQQN IPGVFTTDFP ATPPVKFDYT GNVSRSLWQP 180 ATGTKLYKLK YGSRVQIVLQ DTSIVTPENH PIHLHGYDFY IIAEGFGNFN PKTDTAKFNL 240 VDPPMRNTVA VPSNGWAVIR FVADNPGVWI MHCHLDVHIT WGLAMAFLVE DGVGKLQSLE 300 PPPADLPLC* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02191 | PLN02191 | 5.0e-27 | 182 | 287 | 109 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 3.0e-32 | 144 | 299 | 162 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 5.0e-36 | 38 | 299 | 267 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| pfam07731 | Cu-oxidase_2 | 2.0e-46 | 158 | 293 | 141 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| TIGR03389 | laccase | 1.0e-136 | 1 | 309 | 313 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK92474.1 | 0 | 1 | 309 | 243 | 550 | unknown [Populus trichocarpa] |
| EMBL | CAA74104.1 | 0 | 1 | 309 | 268 | 574 | laccase [Populus trichocarpa] |
| RefSeq | XP_002312186.1 | 0 | 1 | 309 | 267 | 574 | laccase 90a [Populus trichocarpa] |
| RefSeq | XP_002315131.1 | 0 | 1 | 309 | 268 | 575 | laccase 90c [Populus trichocarpa] |
| RefSeq | XP_002520796.1 | 0 | 1 | 309 | 269 | 577 | laccase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 8e-30 | 5 | 299 | 259 | 531 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |
| PDB | 1asq_A | 8e-30 | 5 | 299 | 259 | 531 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |
| PDB | 1asp_B | 8e-30 | 5 | 299 | 259 | 531 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |
| PDB | 1asp_A | 8e-30 | 5 | 299 | 259 | 531 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |
| PDB | 1aso_B | 8e-30 | 5 | 299 | 259 | 531 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DW243722 | 271 | 1 | 270 | 0 |
| EX274037 | 292 | 1 | 291 | 0 |
| DY297248 | 290 | 1 | 288 | 0 |
| DW234577 | 232 | 79 | 310 | 0 |
| EY133298 | 248 | 54 | 301 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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