| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_013993m |
| Family | AA6 |
| Protein Properties | Length: 268 Molecular Weight: 29058.2 Isoelectric Point: 8.9091 |
| Chromosome | Chromosome/Scaffold: 04137 Start: 10646 End: 13754 |
| Description | Quinone reductase family protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA6 | 58 | 252 | 0 |
| KIFIIFYSMYGHVEFLARRMKKGVDSIDGVEAVLYRVSETLPVEVLEQMKAPPKGDEIPVISVNELVNADGFLFGFPTRFGSMASQMKAFFDSTDELWME QKLAGLPAGFFVSTGTQGGGQETTAWTAITQLAHHGMLYVPIGYTFGAGMFRMDSIRGGSPYGAGVFSGDGSRQPTETELALAEHQGKYMATVVK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 268 Download |
| MGKGGGCVPS KKKLIQDPRL PERDSPIITQ NQSQNQSASQ TQPITIQNSI TLPLKKLKIF 60 IIFYSMYGHV EFLARRMKKG VDSIDGVEAV LYRVSETLPV EVLEQMKAPP KGDEIPVISV 120 NELVNADGFL FGFPTRFGSM ASQMKAFFDS TDELWMEQKL AGLPAGFFVS TGTQGGGQET 180 TAWTAITQLA HHGMLYVPIG YTFGAGMFRM DSIRGGSPYG AGVFSGDGSR QPTETELALA 240 EHQGKYMATV VKRFAKPSSP VNGNNHS* 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03358 | FMN_red | 4.0e-9 | 73 | 201 | 132 | + NADPH-dependent FMN reductase. | ||
| pfam00258 | Flavodoxin_1 | 4.0e-10 | 61 | 193 | 143 | + Flavodoxin. | ||
| COG0655 | WrbA | 6.0e-32 | 55 | 254 | 207 | + Multimeric flavodoxin WrbA [General function prediction only] | ||
| TIGR01755 | flav_wrbA | 2.0e-56 | 58 | 253 | 198 | + NAD(P)H:quinone oxidoreductase, type IV. This model represents a protein, WrbA, related to and slightly larger than flavodoxin. It was just shown, in E. coli and Archaeoglobus fulgidus (and previously for some eukaryotic homologs) to act as fourth type of NAD(P)H:quinone oxidoreductase. In E. coli, this protein was earlier reported to be produced during stationary phase, bind to the trp repressor, and make trp operon repression more efficient. WrbA does not interact with the trp operator by itself. Members are found in species in which homologs of the E. coli trp operon repressor TrpR are not detected [Energy metabolism, Electron transport]. | ||
| PRK03767 | PRK03767 | 1.0e-67 | 58 | 255 | 200 | + NAD(P)H:quinone oxidoreductase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0010181 | FMN binding |
| GO:0016491 | oxidoreductase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002273030.1 | 0 | 1 | 256 | 1 | 255 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002280986.1 | 0 | 1 | 259 | 1 | 253 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002306085.1 | 0 | 1 | 267 | 1 | 268 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002519089.1 | 0 | 1 | 267 | 1 | 266 | Minor allergen Alt a, putative [Ricinus communis] |
| RefSeq | XP_002525103.1 | 0 | 1 | 256 | 1 | 256 | Minor allergen Alt a, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4dy4_C | 0 | 58 | 254 | 2 | 195 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
| PDB | 4dy4_A | 0 | 58 | 254 | 2 | 195 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
| PDB | 3b6m_B | 0 | 58 | 254 | 3 | 196 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
| PDB | 3b6m_A | 0 | 58 | 254 | 3 | 196 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
| PDB | 3b6k_B | 0 | 58 | 254 | 3 | 196 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CU596600 | 212 | 54 | 265 | 0 |
| FS328816 | 259 | 1 | 254 | 0 |
| JK988466 | 265 | 1 | 256 | 0 |
| JG479535 | 265 | 1 | 254 | 0 |
| DT489852 | 215 | 54 | 268 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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