| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_015507m |
| Family | CBM43 |
| Protein Properties | Length: 229 Molecular Weight: 24939.9 Isoelectric Point: 7.4668 |
| Chromosome | Chromosome/Scaffold: 06960 Start: 129014 End: 130117 |
| Description | Carbohydrate-binding X8 domain superfamily protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 142 | 224 | 5.1e-35 |
| WCVAKPTLPEPIIQAALDYACGSGADCKSIQPNGLCFQPNNLVAHASYAFNSYWQKKKIAGGTCDFGGTAMLVTVDPSYDNCH | |||
| Full Sequence |
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| Protein Sequence Length: 229 Download |
| MEPRLQHVKI SICAVLIGSI LLLSDARLFG EQRMLEPTEF EPYALPPLES QPTLIPTPPF 60 TVVSPPPSSN FPIKSPPNNF AIPPMYTPIA RPPEYELNPP SIPPRPHYHG LSPPIYQPPL 120 VHPPITAFPS PPPHKKPKFA VWCVAKPTLP EPIIQAALDY ACGSGADCKS IQPNGLCFQP 180 NNLVAHASYA FNSYWQKKKI AGGTCDFGGT AMLVTVDPSY DNCHFVSN* 240 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 2.0e-28 | 142 | 212 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 3.0e-46 | 142 | 225 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN78496.1 | 0 | 13 | 228 | 30 | 262 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI34142.1 | 0 | 13 | 228 | 21 | 253 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002264622.1 | 0 | 41 | 222 | 73 | 256 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002516415.1 | 4.2039e-45 | 140 | 228 | 175 | 263 | conserved hypothetical protein [Ricinus communis] |
| RefSeq | XP_002520569.1 | 0 | 1 | 228 | 1 | 249 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 2e-19 | 127 | 225 | 1 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EG665507 | 157 | 74 | 229 | 0 |
| EG679311 | 157 | 74 | 229 | 0 |
| CK096422 | 155 | 75 | 229 | 0 |
| EG679312 | 255 | 1 | 221 | 0 |
| CV259076 | 150 | 80 | 229 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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