| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_016895m |
| Family | CBM43 |
| Protein Properties | Length: 193 Molecular Weight: 20474.8 Isoelectric Point: 5.8611 |
| Chromosome | Chromosome/Scaffold: 09702 Start: 294783 End: 296350 |
| Description | Carbohydrate-binding X8 domain superfamily protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 102 | 182 | 6.6e-33 |
| WCIASPSASPTALQVALDYACGYGGADCSAIQSGGSCYNPNTLRDHASFAFNSYYQKDPIPSSCNFGGTAVTTNSDPSEFC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 193 Download |
| MHMGATFIYY LVFFLFHLFH SSGTRISKLD HGTEQNHLTS VSKSQKDITT PITTVPTIIP 60 TTPTSSTPIM NPNSDPDSTS PATMTPMITP AITSSPVSGA SWCIASPSAS PTALQVALDY 120 ACGYGGADCS AIQSGGSCYN PNTLRDHASF AFNSYYQKDP IPSSCNFGGT AVTTNSDPSE 180 FCNIFFNQSI NF* 240 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 7.0e-23 | 101 | 172 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 1.0e-34 | 101 | 179 | 80 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC79758.1 | 2e-40 | 20 | 179 | 37 | 186 | hypothetical protein OsI_21142 [Oryza sativa Indica Group] |
| RefSeq | NP_001056434.1 | 4.99997e-41 | 20 | 192 | 37 | 202 | Os05g0581900 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002300880.1 | 2.94273e-44 | 99 | 178 | 1 | 80 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002307548.1 | 9.99967e-42 | 99 | 178 | 1 | 80 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002441577.1 | 1.00053e-42 | 31 | 179 | 21 | 151 | hypothetical protein SORBIDRAFT_09g029700 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 0.00000000000001 | 93 | 179 | 4 | 90 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
