y
Basic Information | |
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Species | Manihot esculenta |
Cazyme ID | cassava4.1_017159m |
Family | CBM43 |
Protein Properties | Length: 186 Molecular Weight: 18304.5 Isoelectric Point: 4.785 |
Chromosome | Chromosome/Scaffold: 00109 Start: 211223 End: 213270 |
Description | plasmodesmata callose-binding protein 3 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 23 | 100 | 2.7e-30 |
CLCKDGLSDAALQKSLDYACGAGADCTQILQSGACFQPNTVKDHCSYAVNSYYQKKGQAVGSCDFSGTATTSANPPSS |
Full Sequence |
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Protein Sequence Length: 186 Download |
MAVLVYLVLL LALAGHSNGA TYCLCKDGLS DAALQKSLDY ACGAGADCTQ ILQSGACFQP 60 NTVKDHCSYA VNSYYQKKGQ AVGSCDFSGT ATTSANPPSS VASGCVYPTS TTGTGTTTTP 120 TTGTGTGTGT GTGTGTGTGT SGLTPTFGLG PTGSGTGIDN SGVAPIEVTS SMLLGLWFPV 180 LLLVF* 240 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 2.0e-19 | 21 | 92 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 4.0e-30 | 21 | 107 | 87 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU19899.1 | 0 | 1 | 117 | 1 | 115 | unknown [Glycine max] |
EMBL | CAN73948.1 | 0 | 1 | 185 | 1 | 192 | hypothetical protein [Vitis vinifera] |
EMBL | CBI27282.1 | 0 | 1 | 110 | 1 | 109 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002311337.1 | 0 | 1 | 182 | 1 | 182 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002316090.1 | 0 | 1 | 112 | 1 | 111 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 2e-18 | 21 | 97 | 12 | 89 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |