| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_020917m |
| Family | CE8 |
| Protein Properties | Length: 303 Molecular Weight: 33205 Isoelectric Point: 4.9963 |
| Chromosome | Chromosome/Scaffold: 02264 Start: 743818 End: 745078 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 2 | 290 | 0 |
| IIVDKGGNGNFSSVQKAIDSVPPNTNSWTHIYIKSGIYEEKVVIPGDKPFIFLQGESKDTTSIEWGESGSSTQSATFTLNADNFVAADLSFKNTYNLALS AVLDDQKPILWAPAATIYGDKASFYNCSFFGVQDTLTDAQGRHYYKSCYIEGAIDFIWGRGQSVYEGCVLNATTGALGKAGYITAQGRESSNDTSGFVFL SCSIYGTGPVDLGRAYRQFSRVVFRNTYMSDVVQPEGWSAWSFVGKEKDIVYSEVSCSGPGADKSKRVKWEKNLTTEELKQLEAKNFIN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 303 Download |
| TIIVDKGGNG NFSSVQKAID SVPPNTNSWT HIYIKSGIYE EKVVIPGDKP FIFLQGESKD 60 TTSIEWGESG SSTQSATFTL NADNFVAADL SFKNTYNLAL SAVLDDQKPI LWAPAATIYG 120 DKASFYNCSF FGVQDTLTDA QGRHYYKSCY IEGAIDFIWG RGQSVYEGCV LNATTGALGK 180 AGYITAQGRE SSNDTSGFVF LSCSIYGTGP VDLGRAYRQF SRVVFRNTYM SDVVQPEGWS 240 AWSFVGKEKD IVYSEVSCSG PGADKSKRVK WEKNLTTEEL KQLEAKNFIN QDGWIQGQPQ 300 VK* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02432 | PLN02432 | 2.0e-92 | 2 | 296 | 295 | + putative pectinesterase | ||
| PLN02682 | PLN02682 | 3.0e-93 | 1 | 296 | 307 | + pectinesterase family protein | ||
| PLN02176 | PLN02176 | 4.0e-95 | 1 | 299 | 302 | + putative pectinesterase | ||
| PLN02480 | PLN02480 | 9.0e-96 | 1 | 295 | 297 | + Probable pectinesterase | ||
| PLN02497 | PLN02497 | 3.0e-129 | 1 | 299 | 301 | + probable pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI40838.1 | 0 | 1 | 299 | 44 | 341 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002263748.1 | 0 | 1 | 299 | 31 | 328 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002323773.1 | 0 | 2 | 299 | 1 | 288 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002512520.1 | 0 | 2 | 283 | 33 | 314 | Pectinesterase-2 precursor, putative [Ricinus communis] |
| RefSeq | XP_002518106.1 | 0 | 1 | 299 | 47 | 335 | Pectinesterase U1 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 1e-36 | 2 | 296 | 9 | 309 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 1e-33 | 3 | 271 | 6 | 277 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3uw0_A | 2e-19 | 12 | 281 | 44 | 350 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_B | 7e-17 | 12 | 186 | 18 | 209 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_A | 7e-17 | 12 | 186 | 18 | 209 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
| Hydropathy |
|---|
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DV984237 | 294 | 11 | 296 | 0 |
| EX317112 | 276 | 29 | 296 | 0 |
| EX315894 | 276 | 29 | 296 | 0 |
| GR458872 | 288 | 5 | 290 | 0 |
| EX687561 | 208 | 1 | 208 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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