| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_021203m |
| Family | CBM43 |
| Protein Properties | Length: 278 Molecular Weight: 28705 Isoelectric Point: 4.2389 |
| Chromosome | Chromosome/Scaffold: 09120 Start: 134216 End: 136216 |
| Description | Carbohydrate-binding X8 domain superfamily protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 117 | 199 | 1.8e-33 |
| WCIASPTAAETALQVALDYACGYGGADCSAIQSGASCYNPNTVRDHASYAFNNYYQKNPIPNSCVFGGTAQLTSTDPSSGNCQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 278 Download |
| MGSHVARYFT IFLYFFFFTS GSSVAETPPL EEIQKNRIAD NQENQIPFSS PVFTTQLDTT 60 GTIPIVNPTT PGTTSPIVNP IESPPAPTII TTTPPAPAAV TTTPPATGTP TSSGGSWCIA 120 SPTAAETALQ VALDYACGYG GADCSAIQSG ASCYNPNTVR DHASYAFNNY YQKNPIPNSC 180 VFGGTAQLTS TDPSSGNCQY ASPNSTPSLS PPVNPTPMTP TTTTTTPTTM TPPITTTPYG 240 VAEPTGLPSS ATSVSFSFLL LCSPMATVGS ILLANHL* 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 1.0e-20 | 116 | 186 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 3.0e-36 | 116 | 200 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK94231.1 | 0 | 7 | 277 | 8 | 304 | unknown [Populus trichocarpa] |
| EMBL | CBI30817.1 | 0 | 113 | 248 | 31 | 164 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_174231.2 | 9.94922e-44 | 116 | 277 | 147 | 315 | unknown protein [Arabidopsis thaliana] |
| RefSeq | XP_002271903.1 | 0 | 1 | 249 | 1 | 260 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002519744.1 | 0 | 22 | 277 | 16 | 282 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 0.000000000000001 | 106 | 202 | 1 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
