| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_021211m |
| Family | CBM43 |
| Protein Properties | Length: 372 Molecular Weight: 40645.6 Isoelectric Point: 4.6797 |
| Chromosome | Chromosome/Scaffold: 03221 Start: 63606 End: 64721 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 252 | 333 | 2.8e-25 |
| WCVMKSSAKIDDPNVAPSVSYACGLADCTSLGYGTSCGGMDARGNISYALNSYYQRQNQLDSACKFENISTITKTDPSTGTC | |||
| GH17 | 1 | 230 | 0 |
| YVAVGNEPFLQTYNGSFLKTTFPALQNVQSALVKAGLSNQVKVTVPLNADVYESSTGVPSGGDFRADIHDLMLTIVKFLSDSGSPFTVNIYPFISLYSDP NFPVEYAFFDGNATPVNDGGTSYYNMFDANYDTLAYSLQKNGFGNLPIIVGEIGWPTDGDRNANVEYAQRFNQGFMSHISGGKGTPMRPGPIDAYLFSLI DEDSKSIDPGNFERHWGIFTFDGRAKYSLN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 372 Download |
| YVAVGNEPFL QTYNGSFLKT TFPALQNVQS ALVKAGLSNQ VKVTVPLNAD VYESSTGVPS 60 GGDFRADIHD LMLTIVKFLS DSGSPFTVNI YPFISLYSDP NFPVEYAFFD GNATPVNDGG 120 TSYYNMFDAN YDTLAYSLQK NGFGNLPIIV GEIGWPTDGD RNANVEYAQR FNQGFMSHIS 180 GGKGTPMRPG PIDAYLFSLI DEDSKSIDPG NFERHWGIFT FDGRAKYSLN LGTMNSGVLV 240 EGKNVRYQER KWCVMKSSAK IDDPNVAPSV SYACGLADCT SLGYGTSCGG MDARGNISYA 300 LNSYYQRQNQ LDSACKFENI STITKTDPST GTCRFEIMIE PYYGGTEHMV GCPQRLLGLA 360 AGFILFWLTI L* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 4.0e-5 | 144 | 222 | 80 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 2.0e-14 | 251 | 322 | 79 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 5.0e-29 | 251 | 335 | 87 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-55 | 1 | 230 | 232 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI38945.1 | 0 | 1 | 371 | 113 | 483 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002273826.1 | 0 | 1 | 371 | 195 | 565 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002309034.1 | 0 | 1 | 351 | 93 | 444 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002331390.1 | 0 | 1 | 346 | 103 | 449 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002530371.1 | 0 | 1 | 371 | 112 | 482 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ur8_B | 8e-36 | 1 | 231 | 89 | 314 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3ur8_A | 8e-36 | 1 | 231 | 89 | 314 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3ur7_B | 8e-36 | 1 | 231 | 89 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 8e-36 | 1 | 231 | 89 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 4gzj_A | 7e-35 | 1 | 231 | 89 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EY783741 | 278 | 7 | 284 | 0 |
| HO797198 | 340 | 1 | 340 | 0 |
| DY825554 | 294 | 40 | 333 | 0 |
| FY450006 | 274 | 1 | 274 | 0 |
| GR925818 | 269 | 18 | 286 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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