| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_021316m |
| Family | GH29 |
| Protein Properties | Length: 314 Molecular Weight: 34939.1 Isoelectric Point: 5.0168 |
| Chromosome | Chromosome/Scaffold: 08316 Start: 389005 End: 390889 |
| Description | alpha-L-fucosidase 1 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH29 | 32 | 121 | 1.1e-21 |
| NRSSAKIGDTDPQYSQRGDPSGHDWVPAECDVSIRPGWFWHASEIPKSALRLLDIYYKSAGRNCLLLLNVPPNSSGLISAEDIQVLQEFA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 314 Download |
| PGAVIFSDAG PDTRWIGDEA GVAGSTCWSI FNRSSAKIGD TDPQYSQRGD PSGHDWVPAE 60 CDVSIRPGWF WHASEIPKSA LRLLDIYYKS AGRNCLLLLN VPPNSSGLIS AEDIQVLQEF 120 AILRISIFSN NLAKNALLNA SSTRGGGTDD SHFNPTNVLE DGIYTYWAPE ESQSAWELHL 180 DLQESVSFNV LQVQEPVHMG QRIIEFHLEI MKNGDWTKVI NGTTVGYQRL LLFPTVESQQ 240 LKFVIDKARA DPLISFLGIY MDKFSSVDNK FDDSSQARFN NSVELQQARS KHFLNSTELL 300 RQITQNHTKT AAM* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3669 | COG3669 | 2.0e-12 | 1 | 260 | 265 | + Alpha-L-fucosidase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004560 | alpha-L-fucosidase activity |
| GO:0005975 | carbohydrate metabolic process |
| GO:0007155 | cell adhesion |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_180377.2 | 0 | 1 | 265 | 217 | 482 | ATFUC1 (alpha-L-fucosidase 1); alpha-L-fucosidase [Arabidopsis thaliana] |
| Swiss-Prot | Q8GW72 | 0 | 1 | 265 | 217 | 482 | FUCO1_ARATH RecName: Full=Alpha-L-fucosidase 1; AltName: Full=Alpha-L-fucoside fucohydrolase; AltName: Full=Alpha-1,3/4-fucosidase; Short=AtFUC1; Flags: Precursor |
| RefSeq | XP_002276131.1 | 0 | 1 | 313 | 229 | 545 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002313533.1 | 0 | 1 | 265 | 193 | 457 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002523703.1 | 0 | 1 | 291 | 242 | 534 | alpha-l-fucosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3eyp_B | 6e-37 | 1 | 260 | 190 | 454 | A Chain A, Crystal Structure Of Putative Alpha-L-Fucosidase From Bacteroides Thetaiotaomicron |
| PDB | 3eyp_A | 6e-37 | 1 | 260 | 190 | 454 | A Chain A, Crystal Structure Of Putative Alpha-L-Fucosidase From Bacteroides Thetaiotaomicron |
| PDB | 3mo4_B | 4e-30 | 1 | 255 | 202 | 473 | A Chain A, The Crystal Structure Of An Alpha-(1-3,4)-Fucosidase From Bifidobacterium Longum Subsp. Infantis Atcc 15697 |
| PDB | 3mo4_A | 4e-30 | 1 | 255 | 202 | 473 | A Chain A, The Crystal Structure Of An Alpha-(1-3,4)-Fucosidase From Bifidobacterium Longum Subsp. Infantis Atcc 15697 |
| PDB | 3ues_B | 4e-30 | 1 | 255 | 200 | 471 | A Chain A, Crystal Structure Of Alpha-1,34-Fucosidase From Bifidobacterium Longum Subsp. Infantis Complexed With Deoxyfuconojirimycin |
| Hydropathy |
|---|
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EY654534 | 272 | 20 | 290 | 0 |
| JG219974 | 259 | 11 | 268 | 0 |
| DV708359 | 255 | 1 | 254 | 0 |
| DY285634 | 293 | 2 | 293 | 0 |
| JG911519 | 283 | 3 | 285 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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