| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_021757m |
| Family | CE8 |
| Protein Properties | Length: 324 Molecular Weight: 35967.8 Isoelectric Point: 9.4347 |
| Chromosome | Chromosome/Scaffold: 02998 Start: 206583 End: 207661 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 10 | 307 | 0 |
| FIVATDGNGNYSKIMDAIAAAPKLSARKFIIKIEKGIYTENVLVEDDKTNIIFIGDGIDKTIISGSRSAGGGYKTYDTATLGIHGNGFMAMDMTIENTAG AANMQAVALRSSARSVFYRCKFSGYQDTLYSHQRKQFYRKCEIYGTIDFIFGDASVVLQNCGIYARLPPKGESNTITITAQGRNKSTENSGIVIQNCTIT AADDLKRSGSSLIKSYLGRPWKEYSTTIVMQSFIDNIIDPAGWLEWENNKTNLATIFYAEYGNRGPGAATNRRVKWTSYHKINRREAMKFTVRNFISG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 324 Download |
| QGQHKTTFDF IVATDGNGNY SKIMDAIAAA PKLSARKFII KIEKGIYTEN VLVEDDKTNI 60 IFIGDGIDKT IISGSRSAGG GYKTYDTATL GIHGNGFMAM DMTIENTAGA ANMQAVALRS 120 SARSVFYRCK FSGYQDTLYS HQRKQFYRKC EIYGTIDFIF GDASVVLQNC GIYARLPPKG 180 ESNTITITAQ GRNKSTENSG IVIQNCTITA ADDLKRSGSS LIKSYLGRPW KEYSTTIVMQ 240 SFIDNIIDPA GWLEWENNKT NLATIFYAEY GNRGPGAATN RRVKWTSYHK INRREAMKFT 300 VRNFISGNEW LPSLGIPFFL DLM* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02416 | PLN02416 | 5.0e-121 | 11 | 318 | 309 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02314 | PLN02314 | 2.0e-121 | 3 | 318 | 318 | + pectinesterase | ||
| PLN02468 | PLN02468 | 3.0e-126 | 9 | 322 | 315 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02713 | PLN02713 | 2.0e-134 | 12 | 322 | 315 | + Probable pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 2.0e-160 | 9 | 308 | 302 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAB57671.1 | 0 | 9 | 318 | 202 | 506 | pectinesterase [Citrus sinensis] |
| GenBank | ACQ85264.1 | 0 | 6 | 318 | 250 | 560 | pectin methylesterase [Musa acuminata AAA Group] |
| RefSeq | XP_002280446.1 | 0 | 9 | 318 | 202 | 509 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002511679.1 | 0 | 9 | 318 | 203 | 510 | Pectinesterase-2 precursor, putative [Ricinus communis] |
| RefSeq | XP_002523113.1 | 0 | 6 | 322 | 242 | 556 | Pectinesterase-3 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 9 | 322 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 11 | 318 | 6 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 5e-25 | 6 | 314 | 2 | 341 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 5e-25 | 6 | 314 | 2 | 341 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 2e-24 | 6 | 314 | 2 | 341 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| HO778758 | 321 | 4 | 322 | 0 |
| HO852920 | 318 | 6 | 322 | 0 |
| DR054787 | 272 | 9 | 279 | 0 |
| CO475715 | 294 | 9 | 300 | 0 |
| DR100880 | 279 | 34 | 311 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
| Phylogeny |
|---|
 |