| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_021990m |
| Family | GH10 |
| Protein Properties | Length: 548 Molecular Weight: 61424.4 Isoelectric Point: 4.9102 |
| Chromosome | Chromosome/Scaffold: 00396 Start: 139437 End: 142133 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH10 | 195 | 455 | 0 |
| QTQSSFPFGCGMNHYILESVDYQNWFTSRFKYTTFTNEMKWYSTEKKQGHENYTIADAMVRFAKQNGISIRGHNIFWDDPKYQPDWVKNLSPDDLREAAA KRINSVVSRYAGQLIAWDVMNENLHFSFYEDKLGVDASAEYFSRAFQLDPGTRLFMNEYNTIENCTDEDANPVNYKKRLEEILGYPGNEGILAGIGAQGH FGSDQPDLAYMRASLDILASTGLPIWLTEVDVDRGPNQAEYLEQILREGHSHPAVEGIIMF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 548 Download |
| MRSSYCLKEP QRAQYGGGIV ANPEFTYSLE GWAVYGEGEI REGLSNNGNR YIISHSRTQS 60 LDSASQKVQF EEGTLYSFSA WIQINRGSES VAAVLRTAGG ELIRVGKVIA RDGCWSFIKG 120 GVFANFSGPA VLLFQSKNTN VEIWIDSVSL QPFTMEQWRS HQEESIQRER KRKVRFHVTY 180 ANKSAVEGAV VSIRQTQSSF PFGCGMNHYI LESVDYQNWF TSRFKYTTFT NEMKWYSTEK 240 KQGHENYTIA DAMVRFAKQN GISIRGHNIF WDDPKYQPDW VKNLSPDDLR EAAAKRINSV 300 VSRYAGQLIA WDVMNENLHF SFYEDKLGVD ASAEYFSRAF QLDPGTRLFM NEYNTIENCT 360 DEDANPVNYK KRLEEILGYP GNEGILAGIG AQGHFGSDQP DLAYMRASLD ILASTGLPIW 420 LTEVDVDRGP NQAEYLEQIL REGHSHPAVE GIIMFVGPEI AGFNVTTLAD KDFKNTPAGD 480 VVDKLIDEWK STTAELIADS EGSIEVSLFH GDYNITVKDP VGNSSTSWNL SLGKDDSEGN 540 AHIYINA* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3693 | XynA | 2.0e-34 | 231 | 430 | 215 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| pfam00331 | Glyco_hydro_10 | 4.0e-54 | 192 | 482 | 320 | + Glycosyl hydrolase family 10. | ||
| smart00633 | Glyco_10 | 2.0e-81 | 233 | 482 | 272 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACU19437.1 | 0 | 3 | 547 | 37 | 581 | unknown [Glycine max] |
| RefSeq | XP_002313181.1 | 0 | 6 | 547 | 34 | 575 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002313182.1 | 0 | 3 | 547 | 2 | 542 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002532419.1 | 0 | 6 | 546 | 8 | 549 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| RefSeq | XP_002532422.1 | 0 | 6 | 527 | 23 | 544 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1nq6_A | 3e-24 | 202 | 482 | 15 | 298 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 2g4f_B | 1e-23 | 197 | 435 | 11 | 247 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 2g4f_A | 1e-23 | 197 | 435 | 11 | 247 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 2g3j_A | 1e-23 | 197 | 435 | 11 | 247 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 2g3i_A | 1e-23 | 197 | 435 | 11 | 247 | A Chain A, Structure Of S.Olivaceoviridis Xylanase Q88aR275A MUTANT |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.8-RXN | EC-3.2.1.8 | endo-1,4-β-xylanase |
| Hydropathy |
|---|
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DV141191 | 250 | 191 | 440 | 0 |
| DV134092 | 256 | 32 | 287 | 0 |
| DV156862 | 248 | 38 | 285 | 0 |
| DV140884 | 220 | 221 | 440 | 0 |
| ES830806 | 292 | 82 | 371 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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