| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_022788m |
| Family | GT4 |
| Protein Properties | Length: 481 Molecular Weight: 53929.3 Isoelectric Point: 8.5269 |
| Chromosome | Chromosome/Scaffold: 03741 Start: 465401 End: 466843 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT4 | 296 | 431 | 2.8e-25 |
| MGAAGRLVRDKGHPLLYEAFSLIRKRHPGVCLVVAGSGPWRRRYAELGSNVKVLGALEPAQLSEFYNAIDVFVNPTLRPQGLDLTLIEAMQCGKPVLTPN YPSIVGTVVVNEEFGYTFSPNVKSFVEALEMVIRDG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 481 Download |
| MGMKHQPHRT TISIRYYSTI LALALLVTSF CLFLSPIAQV QEALLFPSGN TSFSGDLRDA 60 KFPWNKLCFG PTFEKLKLAV FSKTWPIGAA PGGMERHAST LYHALAARGH EIHVFTVPSD 120 RRPHSDIHEG NLHVYFAAND HGSVNCSLAF EIFNKIGTDV PFDYVHTESV SLPHWRAKMV 180 PDVAVTWHGI WYEIMHSKLF EELFSNPNGV LPGPMTELQE AMPRLIEEIR FFSSYKHHIC 240 ISNSAGEVLM NIYQLPQRNV HVILNGVDHT KFVHNPEAGT RFRRRYGIPE NASLVMGAAG 300 RLVRDKGHPL LYEAFSLIRK RHPGVCLVVA GSGPWRRRYA ELGSNVKVLG ALEPAQLSEF 360 YNAIDVFVNP TLRPQGLDLT LIEAMQCGKP VLTPNYPSIV GTVVVNEEFG YTFSPNVKSF 420 VEALEMVIRD GPKVLHKKGL ACKEYALSMF TATKMASAYE RFFLCMKNTK YCQYPLPTDC 480 * 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR00032 | argG | 7.0e-36 | 92 | 461 | 389 | + argininosuccinate synthase. argG in bacteria, ARG1 in Saccharomyces cerevisiae. There is a very unusual clustering in the alignment, with a deep split between one cohort of E. coli, H. influenzae, and Streptomyces, and the other cohort of eukaryotes, archaea, and the rest of the eubacteria [Amino acid biosynthesis, Glutamate family]. | ||
| COG0438 | RfaG | 3.0e-36 | 77 | 463 | 397 | + Glycosyltransferase [Cell envelope biogenesis, outer membrane] | ||
| cd03807 | GT1_WbnK_like | 5.0e-37 | 223 | 463 | 251 | + This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. | ||
| cd03798 | GT1_wlbH_like | 2.0e-41 | 92 | 463 | 408 | + This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. | ||
| cd03801 | GT1_YqgM_like | 2.0e-66 | 77 | 463 | 400 | + This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD55663.1 | 0 | 20 | 470 | 27 | 476 | AC008017_36 Hypothetical protein [Arabidopsis thaliana] |
| RefSeq | NP_177459.1 | 0 | 20 | 479 | 27 | 485 | glycosyl transferase family 1 protein [Arabidopsis thaliana] |
| RefSeq | XP_002317369.1 | 0 | 1 | 480 | 1 | 484 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002519899.1 | 0 | 1 | 475 | 2 | 486 | glycosyltransferase, putative [Ricinus communis] |
| RefSeq | XP_002524261.1 | 0 | 1 | 479 | 1 | 484 | glycosyltransferase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3oka_B | 0.00000002 | 265 | 392 | 170 | 307 | A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' In Complex With Gdp-Man (Triclinic Crystal Form) |
| PDB | 3oka_A | 0.00000002 | 265 | 392 | 170 | 307 | A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' In Complex With Gdp-Man (Triclinic Crystal Form) |
| PDB | 3okp_A | 0.00000002 | 265 | 392 | 170 | 307 | A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' In Complex With Gdp-Man (Triclinic Crystal Form) |
| PDB | 3okc_A | 0.00000002 | 265 | 392 | 170 | 307 | A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' Bound To Gdp (Orthorhombic Crystal Form) |
| PDB | 2f9f_A | 0.00002 | 344 | 433 | 78 | 165 | A Chain A, Crystal Structure Of The Putative Mannosyl Transferase (Wbaz-1)from Archaeoglobus Fulgidus, Northeast Structural Genomics Target Gr29a |
