| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_022883m |
| Family | GH14 |
| Protein Properties | Length: 540 Molecular Weight: 61185.3 Isoelectric Point: 5.9515 |
| Chromosome | Chromosome/Scaffold: 03581 Start: 1504972 End: 1510973 |
| Description | beta-amylase 2 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 115 | 532 | 0 |
| YVMLPLGVIDMNCELVDPEGLQNELKTLKSANVDGVMVDCWWGIVEGNAPQLYNWSGYKKLFQIVREHKLKLQVVMSFHKCGGNVGDDVHIPLPKWVTEI GQTNPDIYFTDREGRRNTECLTWGIDKERVLKGRTAVEAYFDYMRSFRVEFDEFFEAGIISEIEVGLGPCGELRYPSYPAEHGWKYPGIGEFQCYDKYLM KSLSKAAELRGHLFWAKCPNNAGSYNSAPYETRFFCDGGDYDSYYGRFFLNWYSRVLIDHGDRVLALANLAFEGTCISAKISGIHWWYKTASHAAELTAG FYNPSNRDGYAPIAAMLSKHGVGLNFTCVEMRTLDQNEDFPEALADPEGLVWQVLNAAWDACIPVASENALPCYDREGYNKILENAKPRHDPDGRHLSVF TYLRLSPALMERHNFIEF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 540 Download |
| MAISSIRFLH CLRPCNVASS AIVSSYVSHT LSFVASMSRF HSSSSECSFC CFSGGLVSCG 60 ARSRNFARVR DRVHRTEDDP ILGDSMDDIE GKKDADISLQ VQERDFTGTA YVPVYVMLPL 120 GVIDMNCELV DPEGLQNELK TLKSANVDGV MVDCWWGIVE GNAPQLYNWS GYKKLFQIVR 180 EHKLKLQVVM SFHKCGGNVG DDVHIPLPKW VTEIGQTNPD IYFTDREGRR NTECLTWGID 240 KERVLKGRTA VEAYFDYMRS FRVEFDEFFE AGIISEIEVG LGPCGELRYP SYPAEHGWKY 300 PGIGEFQCYD KYLMKSLSKA AELRGHLFWA KCPNNAGSYN SAPYETRFFC DGGDYDSYYG 360 RFFLNWYSRV LIDHGDRVLA LANLAFEGTC ISAKISGIHW WYKTASHAAE LTAGFYNPSN 420 RDGYAPIAAM LSKHGVGLNF TCVEMRTLDQ NEDFPEALAD PEGLVWQVLN AAWDACIPVA 480 SENALPCYDR EGYNKILENA KPRHDPDGRH LSVFTYLRLS PALMERHNFI EFERFVKRMH 540 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00197 | PLN00197 | 2.0e-161 | 112 | 539 | 435 | + beta-amylase; Provisional | ||
| PLN02803 | PLN02803 | 6.0e-174 | 112 | 539 | 432 | + beta-amylase | ||
| PLN02905 | PLN02905 | 0 | 57 | 540 | 484 | + beta-amylase | ||
| PLN02705 | PLN02705 | 0 | 96 | 540 | 445 | + beta-amylase | ||
| PLN02801 | PLN02801 | 0 | 111 | 540 | 437 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI40370.1 | 0 | 1 | 540 | 1 | 539 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_191958.3 | 0 | 5 | 540 | 2 | 523 | BAM2 (BETA-AMYLASE 2); beta-amylase [Arabidopsis thaliana] |
| RefSeq | XP_002274612.1 | 0 | 1 | 540 | 1 | 565 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002320794.1 | 0 | 105 | 540 | 1 | 436 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002511858.1 | 0 | 1 | 540 | 1 | 532 | Beta-amylase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ukp_D | 0 | 111 | 540 | 11 | 442 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1ukp_C | 0 | 111 | 540 | 11 | 442 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1ukp_B | 0 | 111 | 540 | 11 | 442 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1ukp_A | 0 | 111 | 540 | 11 | 442 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1uko_D | 0 | 111 | 540 | 11 | 442 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
| Hydropathy |
|---|
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DV466053 | 269 | 272 | 540 | 0 |
| DV021150 | 292 | 197 | 488 | 0 |
| CO447286 | 289 | 189 | 477 | 0 |
| GR062214 | 263 | 155 | 417 | 0 |
| GR933701 | 264 | 198 | 461 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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