| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_022889m |
| Family | CE8 |
| Protein Properties | Length: 301 Molecular Weight: 33457.1 Isoelectric Point: 9.5738 |
| Chromosome | Chromosome/Scaffold: 02998 Start: 209757 End: 210766 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 2 | 284 | 0 |
| DAIAAAPKHSARKFIIKIEKGIYTENVLVEDDKTNIIFIGDGIDKTIISGSRSAGGGYKTYKTATLGIRGDGFMAMDITIENTAGAANKQAVALRSSAQS VFYRCKFSGYQDTLYTNQKKQFYRQCEIYGTIDFIFGDATVVLQNCAIYARLPPKGESNTITITAQGRNKSTENSGIVIQNCTITAADDLKRSGSSLIKS YLGRPWKEYSTTIVMQSFIDNIIDPAGWLEWENNKTNLATIFYAEYENRGPGAATNRRVKWTSYHKINRREAMKFTVRNFISG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 301 Download |
| MDAIAAAPKH SARKFIIKIE KGIYTENVLV EDDKTNIIFI GDGIDKTIIS GSRSAGGGYK 60 TYKTATLGIR GDGFMAMDIT IENTAGAANK QAVALRSSAQ SVFYRCKFSG YQDTLYTNQK 120 KQFYRQCEIY GTIDFIFGDA TVVLQNCAIY ARLPPKGESN TITITAQGRN KSTENSGIVI 180 QNCTITAADD LKRSGSSLIK SYLGRPWKEY STTIVMQSFI DNIIDPAGWL EWENNKTNLA 240 TIFYAEYENR GPGAATNRRV KWTSYHKINR REAMKFTVRN FISGNAWLPS LGIPFFLDLM 300 * 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02314 | PLN02314 | 2.0e-116 | 2 | 295 | 296 | + pectinesterase | ||
| PLN03043 | PLN03043 | 5.0e-118 | 2 | 300 | 303 | + Probable pectinesterase/pectinesterase inhibitor; Provisional | ||
| PLN02468 | PLN02468 | 2.0e-118 | 2 | 299 | 299 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02713 | PLN02713 | 4.0e-130 | 2 | 299 | 302 | + Probable pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 6.0e-156 | 2 | 285 | 286 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAB57671.1 | 0 | 2 | 295 | 218 | 506 | pectinesterase [Citrus sinensis] |
| EMBL | CBI24285.1 | 0 | 3 | 295 | 150 | 440 | unnamed protein product [Vitis vinifera] |
| Swiss-Prot | O04887 | 0 | 2 | 295 | 218 | 506 | PME2_CITSI RecName: Full=Pectinesterase 2; Short=PE 2; AltName: Full=Pectin methylesterase; Flags: Precursor |
| RefSeq | XP_002280446.1 | 0 | 3 | 295 | 219 | 509 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002511679.1 | 0 | 2 | 295 | 219 | 510 | Pectinesterase-2 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 2 | 299 | 24 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 2 | 295 | 20 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 3e-24 | 2 | 291 | 23 | 341 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 3e-24 | 2 | 291 | 23 | 341 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 1e-23 | 2 | 291 | 23 | 341 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO852920 | 299 | 2 | 299 | 0 |
| HO778758 | 299 | 3 | 299 | 0 |
| DR100880 | 279 | 11 | 288 | 0 |
| DT739296 | 281 | 15 | 294 | 0 |
| CV543915 | 267 | 3 | 268 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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